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IMGVR_UViG_3300009503_001366-3300009503-Ga0123519_1000244540
Arc-VirIMGVR_UViG_3300009503_001366-3300009503-Ga0123519_1000244540
Identity
- Kingdom:
- archaea
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 119-162
Domain cluster:
rep: IMGVR_UViG_3300002966_001123-3300002966-JGI24721J44947_1000100537__D312-354
D2
medium
residues 2-103
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zpjA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 49.0 | 3.41e-01 | 79.4% | 48.0% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 45.0 | 3.74e-01 | 79.4% | 61.5% |
| 3zilA00 | 1.25.10.60 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Rad61, Wapl domain | 0.57 | 45.0 | 3.12e-01 | 85.3% | 47.0% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 39.0 | 3.82e-01 | 74.5% | 77.4% |
| 3mkrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 44.0 | 3.24e-01 | 88.2% | 44.3% |
| 4l3tA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 37.0 | 2.88e-01 | 72.5% | 85.8% |
| 8amzP01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 46.0 | 3.18e-01 | 100.0% | 55.5% |
| 2xheA04 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 40.0 | 3.86e-01 | 82.4% | 72.0% |
| 1epuA03 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 40.0 | 3.76e-01 | 82.4% | 68.5% |
| 2jo7A00 | 1.10.4170.10 | Mainly Alpha › Orthogonal Bundle › Glycosylphosphatidylinositol-anchored merozoite surface protein › Glycosylphosphatidylinositol-anchored merozoite surface protein | 0.52 | 35.0 | 2.75e-01 | 70.6% | 32.1% |
| 3hi0A03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 38.0 | 3.10e-01 | 79.4% | 56.7% |
| 1d1dA02 | 1.10.1200.30 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Retrovirus capsid C-terminal domain | 0.51 | 31.0 | 3.44e-01 | 81.4% | 77.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3808938 | 109.4.1.1335 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif | 0.69 | 53.0 | 3.71e-01 | 81.4% | 54.5% |
| 4392906 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 49.0 | 3.79e-01 | 80.4% | 77.9% |
| 3320599 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.63 | 51.0 | 4.95e-01 | 85.3% | 95.5% |
| 3801230 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 46.0 | 3.64e-01 | 77.5% | 95.3% |
| 3298593 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.62 | 45.0 | 3.37e-01 | 76.5% | 55.9% |
| None | — | 0.62 | 51.0 | 3.57e-01 | 90.2% | 66.1% | |
| 4541732 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 3.35e-01 | 90.2% | 47.7% |
| None | — | 0.61 | 47.0 | 3.77e-01 | 83.3% | 56.2% | |
| 3635080 | 109.4.1.1651 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_EMC2 | 0.60 | 48.0 | 3.46e-01 | 88.2% | 61.3% |
| 3601631 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 46.0 | 3.28e-01 | 82.4% | 53.1% |
| 143664 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.57 | 45.0 | 3.40e-01 | 84.3% | 85.0% |
| 3502054 | 109.4.1.259 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tra1_ring | 0.57 | 44.0 | 3.34e-01 | 83.3% | 61.6% |
| 4612692 | 109.4.1.427 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SDA1_HEAT | 0.56 | 48.0 | 3.45e-01 | 97.1% | 67.3% |
| 4301546 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 47.0 | 3.29e-01 | 94.1% | 67.1% |
| 4940672 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 40.0 | 4.00e-01 | 76.5% | 99.0% |
| 3732246 | 109.4.1.68 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Coatomer_E | 0.54 | 42.0 | 3.12e-01 | 86.3% | 85.6% |
| 4038724 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 46.0 | 3.64e-01 | 97.1% | 78.6% |
| 3924749 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 43.0 | 2.99e-01 | 91.2% | 62.1% |
| 4311002 | 4198.1.1.2 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like › ThylakoidFormat | 0.51 | 46.0 | 3.65e-01 | 99.0% | 77.6% |