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IMGVR_UViG_3300009506_002491-3300009506-Ga0118657_1003823711

Arc-Vir

IMGVR_UViG_3300009506_002491-3300009506-Ga0118657_1003823711

Quality

85.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-121
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 37.0 3.34e-01 100.0% 46.4%
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.60 36.0 4.17e-01 75.9% 92.3%
4ntwB00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.58 30.0 3.47e-01 81.9% 67.8%
6q61A00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.57 30.0 3.41e-01 81.9% 67.8%
1aalB00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.56 29.0 3.40e-01 81.9% 70.2%
4bd9B01 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.56 29.0 3.46e-01 81.9% 74.1%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 34.0 2.41e-01 97.6% 18.8%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.52 31.0 3.26e-01 100.0% 64.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3492427 384.1.1.1 few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.54 30.0 3.16e-01 81.9% 57.3%
3511269 214.1.1.9 a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.53 37.0 3.31e-01 73.5% 69.2%
5044501 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 37.0 3.46e-01 80.7% 83.6%
3740450 328.1.1.3 a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 0.50 38.0 3.75e-01 83.1% 100.0%
D2 medium residues 122-205
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d7jA00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.56 42.0 3.67e-01 81.0% 52.2%
2dj6B00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.55 40.0 3.70e-01 81.0% 57.4%
3ljsA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 36.0 2.45e-01 73.8% 46.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3544841 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 36.0 3.10e-01 75.0% 37.8%
5004730 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.57 42.0 3.90e-01 81.0% 59.3%
4990587 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.56 44.0 3.94e-01 85.7% 60.5%
3436318 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.52 34.0 3.36e-01 79.8% 60.2%
3576081 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.50 37.0 2.31e-01 82.1% 60.2%