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IMGVR_UViG_3300009508_002326-3300009508-Ga0115567_100110511
Arc-VirIMGVR_UViG_3300009508_002326-3300009508-Ga0115567_100110511
Identity
- Kingdom:
- archaea
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-89
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 41.0 | 3.99e-01 | 98.9% | 56.1% |
| 3mqzA00 | 3.30.930.20 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 | 0.60 | 50.0 | 3.93e-01 | 96.6% | 42.4% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.56 | 31.0 | 3.32e-01 | 98.9% | 60.8% |
| 5wjpA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 32.0 | 3.17e-01 | 97.7% | 52.6% |
| 4i62A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 33.0 | 3.31e-01 | 94.3% | 57.0% |
| 5zneA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.53e-01 | 92.0% | 74.0% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.44e-01 | 98.9% | 67.5% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 33.0 | 3.45e-01 | 98.9% | 70.4% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 32.0 | 3.42e-01 | 100.0% | 72.4% |
| 2nn6D00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.51 | 44.0 | 3.45e-01 | 100.0% | 94.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 139662 | 241.12.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › DUF1054 | 0.60 | 50.0 | 3.93e-01 | 96.6% | 42.4% |
| 3291834 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 34.0 | 3.77e-01 | 97.7% | 75.7% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.56 | 36.0 | 3.72e-01 | 98.9% | 70.0% |
| 3592631 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.54 | 47.0 | 3.30e-01 | 100.0% | 65.0% |
| 4165803 | 206.1.3.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH-S_ATP | 0.53 | 41.0 | 3.23e-01 | 85.1% | 68.7% |
| 4927166 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.51 | 34.0 | 3.82e-01 | 74.7% | 93.8% |
| 4212999 | 2003.1.5.259 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020, Cons_hypoth95, Methyltrans_SAM | 0.51 | 39.0 | 2.47e-01 | 85.1% | 17.6% |
| 4540956 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.51 | 38.0 | 2.92e-01 | 83.9% | 87.1% |
| 5050596 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 31.0 | 3.31e-01 | 97.7% | 74.3% |