←Back to structures
IMGVR_UViG_3300009518_000014-3300009518-Ga0116128_100031544
Arc-VirIMGVR_UViG_3300009518_000014-3300009518-Ga0116128_100031544
Identity
- Kingdom:
- archaea
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-70
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ix7A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.89 | 65.0 | 4.60e-01 | 77.1% | 48.1% |
| 2py5A04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.74 | 49.0 | 5.40e-01 | 70.8% | 91.7% |
| 2z7bA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.70 | 49.0 | 3.14e-01 | 75.0% | 33.8% |
| 1w63A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 59.0 | 3.34e-01 | 97.9% | 14.3% |
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 60.0 | 3.68e-01 | 100.0% | 31.2% |
| 7ldgA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 59.0 | 3.80e-01 | 95.8% | 44.1% |
| 3c5wA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.68 | 59.0 | 3.82e-01 | 100.0% | 39.9% |
| 3i6iA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.65 | 57.0 | 4.28e-01 | 100.0% | 76.9% |
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.63 | 54.0 | 4.84e-01 | 97.9% | 98.5% |
| 1br2A04 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 51.0 | 3.59e-01 | 95.8% | 97.0% |
| 4jxtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 49.0 | 3.72e-01 | 95.8% | 47.7% |
| 3tjtA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.61 | 49.0 | 4.46e-01 | 100.0% | 66.2% |
| 3c1oA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.61 | 51.0 | 3.84e-01 | 100.0% | 72.9% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 50.0 | 4.32e-01 | 100.0% | 79.0% |
| 1ei6A01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.55 | 49.0 | 2.99e-01 | 100.0% | 68.9% |
| 1v32A00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.54 | 41.0 | 3.52e-01 | 100.0% | 74.3% |
| 4bjtA02 | 1.10.10.2170 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 43.0 | 4.30e-01 | 95.8% | 86.0% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 43.0 | 3.88e-01 | 95.8% | 81.2% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.51 | 44.0 | 2.63e-01 | 100.0% | 19.7% |
| 2cx6A00 | 3.30.370.10 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › Barstar-like | 0.51 | 44.0 | 3.65e-01 | 100.0% | 74.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4182426 | 192.6.1.2 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATPD_C_fung | 0.79 | 56.0 | 5.62e-01 | 75.0% | 77.1% |
| 3738598 | 192.6.1.2 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATPD_C_fung | 0.76 | 54.0 | 5.75e-01 | 75.0% | 92.5% |
| 4305528 | 109.4.1.222 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DCB | 0.75 | 65.0 | 4.19e-01 | 97.9% | 26.4% |
| 3611212 | 109.4.1.326 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_M | 0.74 | 62.0 | 3.80e-01 | 93.8% | 18.3% |
| 3660038 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 64.0 | 3.57e-01 | 97.9% | 10.2% |
| 3368785 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 66.0 | 4.94e-01 | 100.0% | 73.9% |
| 3855274 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.72 | 64.0 | 4.30e-01 | 100.0% | 54.3% |
| 3865185 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.72 | 64.0 | 5.07e-01 | 100.0% | 56.8% |
| 3679557 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.70 | 60.0 | 5.02e-01 | 97.9% | 62.4% |
| 3993061 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 59.0 | 3.95e-01 | 97.9% | 49.2% |
| 2140319 | 109.4.1.1259 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 | 0.68 | 57.0 | 3.96e-01 | 91.7% | 51.3% |
| 4262002 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.68 | 57.0 | 3.60e-01 | 97.9% | 17.8% |
| 3571953 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 54.0 | 3.45e-01 | 97.9% | 37.3% |
| 3670247 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.63 | 52.0 | 3.89e-01 | 97.9% | 43.8% |
| 3496154 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.57 | 46.0 | 2.81e-01 | 100.0% | 30.8% |
| 5020026 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.57 | 49.0 | 4.04e-01 | 95.8% | 94.1% |
| 3827389 | 4995.1.1.11 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › Hydrophob_seed | 0.53 | 42.0 | 3.74e-01 | 85.4% | 75.7% |