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IMGVR_UViG_3300009518_000063-3300009518-Ga0116128_100071213
Arc-VirIMGVR_UViG_3300009518_000063-3300009518-Ga0116128_100071213
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-54_68-87
Domain cluster:
representative
D2
medium
residues 88-181_336-355_482-533
Domain cluster:
rep: IMGVR_UViG_3300026204_000079-3300026204-Ga0208521_10073952__D89-176_214-226_315-343_439-514
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.53 | 23.0 | 3.04e-01 | 98.2% | 72.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965223 | 3121.1.1.5 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_3 | 0.51 | 24.0 | 3.30e-01 | 79.5% | 92.0% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.51 | 29.0 | 3.03e-01 | 88.6% | 59.3% |
| 3520104 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.50 | 23.0 | 3.22e-01 | 81.9% | 88.7% |
D3
medium
residues 262-300
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 40.0 | 3.66e-01 | 76.9% | 61.4% |
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 42.0 | 2.48e-01 | 92.3% | 96.4% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 39.0 | 3.61e-01 | 76.9% | 57.9% |
D4
medium
residues 356-447
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.62 | 30.0 | 2.71e-01 | 84.8% | 36.1% |
| 1jqjC02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.53 | 38.0 | 3.78e-01 | 92.4% | 71.9% |
| 1v2xA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.51 | 37.0 | 3.00e-01 | 77.2% | 96.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625874 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.76 | 46.0 | 4.01e-01 | 100.0% | 41.5% |
| 3404650 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.63 | 29.0 | 2.38e-01 | 92.4% | 26.2% |
| 4618841 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.55 | 34.0 | 2.30e-01 | 95.7% | 17.3% |
| 3400659 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 25.0 | 2.07e-01 | 91.3% | 24.8% |
| 3167096 | 109.4.1.628 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS | 0.52 | 43.0 | 2.58e-01 | 92.4% | 22.6% |