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IMGVR_UViG_3300009518_000164-3300009518-Ga0116128_10057076

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300009518_000164-3300009518-Ga0116128_10057076 ↗
Kingdom:: archaea

Quality

93.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-117

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17248.8 best	DUF5317	45.4	1.20e-11	79.5%	60.9%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
8hk0C01	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.72	42.0	3.86e-01	93.2%	44.7%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.65	45.0	4.77e-01	100.0%	79.2%
2oarB00	1.10.1200.120	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1	0.64	38.0	3.73e-01	98.3%	54.4%
1f02T00	4.10.820.10	Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain	0.56	30.0	3.79e-01	76.1%	89.4%
3cqcA00	1.20.190.50	Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 ›	0.56	40.0	3.10e-01	95.7%	34.8%
2nrjA01	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.55	50.0	3.62e-01	100.0%	44.2%
4p79A00	1.20.140.150	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 ›	0.52	45.0	3.87e-01	92.3%	92.8%
2zdiC00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.51	46.0	4.28e-01	98.3%	83.1%
5mmiG01	3.90.930.12	Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6	0.50	26.0	3.05e-01	84.6%	70.2%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3430282	601.1.2.68 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DUF1218	0.65	44.0	3.87e-01	96.6%	47.6%
4025072	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.65	39.0	4.00e-01	99.1%	61.7%
3627597	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.61	49.0	3.34e-01	100.0%	25.8%
3954591	1075.1.2.3 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › DUF2567	0.59	34.0	3.11e-01	98.3%	41.2%
3680858	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.55	50.0	4.47e-01	100.0%	71.5%
3446586	2007.1.19.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like	0.54	40.0	2.79e-01	99.1%	24.4%
3696633	3393.1.1.2 ↗	extended segments › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › Kinesin_assoc	0.54	37.0	4.04e-01	90.6%	86.3%
5064976	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.54	29.0	2.67e-01	83.8%	38.7%
4931721	4333.1.1.1 ↗	a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S	0.54	47.0	3.24e-01	94.9%	54.7%
3715658	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.52	43.0	3.38e-01	98.3%	41.6%
3409703	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.52	48.0	4.63e-01	100.0%	93.1%
5039314	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.51	46.0	4.20e-01	100.0%	78.7%
3547409	604.1.1.153 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4455	0.50	44.0	3.76e-01	100.0%	84.0%