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IMGVR_UViG_3300009519_000011-3300009519-Ga0116108_10003305

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300009519_000011-3300009519-Ga0116108_10003305 ↗
Kingdom:: archaea

Quality

68.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-63

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5cxxB00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.63	56.0	3.59e-01	100.0%	42.7%
4w9rB01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.62	53.0	3.46e-01	98.2%	40.1%
3dohA02	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.58	50.0	3.37e-01	100.0%	48.3%
1fneA01	3.10.320.10	Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1	0.58	38.0	3.42e-01	86.0%	49.4%
3gffA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.58	49.0	3.13e-01	100.0%	38.9%
4exoA00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.58	39.0	2.93e-01	73.7%	27.4%
2qm0A01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.53	43.0	2.96e-01	100.0%	48.4%
3bxpB00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.52	43.0	2.89e-01	100.0%	38.9%
2crfA01	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.51	41.0	3.26e-01	91.2%	44.8%
2d9vA01	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.51	44.0	3.61e-01	100.0%	76.9%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4256317	375.1.1.38 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon	0.78	43.0	4.39e-01	70.2%	56.4%
3295296	4.8.1.7 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE	0.60	42.0	4.52e-01	93.0%	93.3%
4014830	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.60	46.0	4.71e-01	96.5%	89.1%
3816553	4.1.1.306 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N	0.59	43.0	4.39e-01	100.0%	81.8%
5031616	4.26.1.0 ↗	beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7	0.59	40.0	4.08e-01	70.2%	72.7%
2485688	64.5.1.1 ↗	beta meanders › WW domain-like › Connector region of RNA helicase HrpB › Connector region of RNA helicase HrpB › CON_HrpB	0.58	35.0	4.12e-01	70.2%	94.4%
4981973	2004.1.1.146 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase	0.57	40.0	2.64e-01	73.7%	20.0%
4949036	375.1.1.21 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1	0.57	44.0	4.60e-01	96.5%	98.0%
3935534	375.1.9.2 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › SANTA	0.54	37.0	2.87e-01	100.0%	30.4%
4977713	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.53	46.0	2.98e-01	98.2%	45.5%
3253855	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.52	44.0	3.96e-01	100.0%	87.1%