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IMGVR_UViG_3300009519_000012-3300009519-Ga0116108_100038132
Arc-VirIMGVR_UViG_3300009519_000012-3300009519-Ga0116108_100038132
Identity
- Kingdom:
- archaea
Quality
63.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 140-199
D2
medium
residues 1-89
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.59 | 29.0 | 3.08e-01 | 86.5% | 48.8% |
| 4jleA00 | 6.10.280.180 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium RESA, N-terminal helical domain | 0.57 | 42.0 | 3.54e-01 | 77.5% | 60.4% |
| 1tmxB00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.55 | 34.0 | 2.44e-01 | 89.9% | 19.5% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 4.15e-01 | 85.4% | 86.7% |
| 3nnrA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 40.0 | 3.14e-01 | 92.1% | 36.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950026 | 1076.1.1.4 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease | 0.56 | 48.0 | 3.66e-01 | 97.8% | 47.7% |
| 4943321 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.53 | 40.0 | 2.59e-01 | 83.1% | 57.9% |
| 3252602 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.53 | 45.0 | 2.77e-01 | 100.0% | 48.6% |
| 3961236 | 4120.1.1.41 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Transposase_mut | 0.52 | 36.0 | 3.95e-01 | 76.4% | 92.9% |
| 4243384 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.51 | 38.0 | 3.52e-01 | 79.8% | 72.2% |
D3
medium
residues 90-139
Domain cluster:
rep: IMGVR_UViG_3300009548_000030-3300009548-Ga0116107_100066812__D94-136