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IMGVR_UViG_3300009519_000012-3300009519-Ga0116108_100038142

Arc-Vir

IMGVR_UViG_3300009519_000012-3300009519-Ga0116108_100038142

Quality

88.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-97
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hoiA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.59 47.0 3.74e-01 85.3% 97.4%
3fw3B00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.54 38.0 2.81e-01 72.6% 83.5%
4pz6A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.52 42.0 3.30e-01 92.6% 89.0%
2xtsA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 36.0 3.33e-01 75.8% 98.5%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 36.0 2.89e-01 75.8% 80.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1252346 268.1.1.3 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2_2 0.59 41.0 4.04e-01 73.7% 87.6%
3478976 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.54 39.0 3.70e-01 75.8% 73.0%
3300371 223.1.1.28 a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N 0.53 36.0 2.82e-01 70.5% 82.9%
5040205 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.68e-01 85.3% 67.0%
D2 high residues 103-222
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25187.2 best Acb3 124.5 8.40e-36 100.0% 53.2%