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IMGVR_UViG_3300009519_000059-3300009519-Ga0116108_10012393
Arc-VirIMGVR_UViG_3300009519_000059-3300009519-Ga0116108_10012393
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 62-75_87-207
Domain cluster:
rep: MW794162.1__QVW02070.1__2017DhaN_1095__00219__D3-97
D2
medium
residues 208-287_402-452
Domain cluster:
rep: KJ018211.1__AHK11508.1__S140_101__00098__D186-258_329-345_378-443_515-527
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04095.23 best | NAPRTase | 38.8 | 1.30e-09 | 53.4% | 25.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g95B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.97 | 92.0 | 7.07e-01 | 97.7% | 91.7% |
| 3nzpB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.67 | 60.0 | 4.77e-01 | 97.7% | 99.2% |
| 3cpgA00 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.65 | 57.0 | 4.57e-01 | 94.7% | 94.5% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.65 | 59.0 | 4.19e-01 | 99.2% | 52.6% |
| 1to3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 52.0 | 4.04e-01 | 90.1% | 89.0% |
| 1jcjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 54.0 | 4.34e-01 | 94.7% | 98.4% |
| 1pwuA04 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.61 | 37.0 | 3.11e-01 | 92.4% | 36.2% |
| 2vg0A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.60 | 47.0 | 3.97e-01 | 84.0% | 88.1% |
| 7xg9A01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.57 | 45.0 | 3.57e-01 | 85.5% | 95.8% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.55 | 29.0 | 3.48e-01 | 85.5% | 75.9% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 43.0 | 3.48e-01 | 84.7% | 100.0% |
| 4nq1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 3.68e-01 | 99.2% | 83.8% |
| 3lerA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 47.0 | 3.62e-01 | 100.0% | 81.8% |
| 3h5dA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.56e-01 | 98.5% | 81.5% |
| 2efjA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 45.0 | 3.87e-01 | 100.0% | 92.1% |
| 6vr7A02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.50 | 39.0 | 3.93e-01 | 93.9% | 79.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4890693 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.99 | 86.0 | 6.23e-01 | 89.3% | 75.8% |
| 4888125 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.98 | 93.0 | 6.74e-01 | 97.7% | 78.8% |
| 3898322 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.96 | 93.0 | 6.56e-01 | 100.0% | 70.1% |
| 4853186 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.95 | 91.0 | 6.58e-01 | 97.7% | 75.7% |
| 3496197 | 2002.4.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like | 0.94 | 91.0 | 6.68e-01 | 100.0% | 78.0% |
| 4954704 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.93 | 90.0 | 6.67e-01 | 100.0% | 82.4% |
| 1778179 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.93 | 91.0 | 6.42e-01 | 100.0% | 70.4% |
| 3682502 | 2002.1.1.101 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N | 0.69 | 62.0 | 4.71e-01 | 98.5% | 99.0% |
| 148675 | 2498.1.1.34 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › ATLF | 0.61 | 37.0 | 3.09e-01 | 92.4% | 35.4% |
| 4006367 | 2002.1.1.53 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N | 0.60 | 55.0 | 4.39e-01 | 99.2% | 96.8% |
| 2520636 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.57 | 43.0 | 3.46e-01 | 80.9% | 71.4% |
| 3839203 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.54 | 38.0 | 4.00e-01 | 93.1% | 79.2% |
| 4083049 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.52 | 42.0 | 3.91e-01 | 93.9% | 67.6% |
| 2969846 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.51 | 42.0 | 3.96e-01 | 93.1% | 74.2% |
| 2713909 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.50 | 39.0 | 3.85e-01 | 93.9% | 75.5% |
| 3836058 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.50 | 37.0 | 3.66e-01 | 78.6% | 89.0% |