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IMGVR_UViG_3300009519_000117-3300009519-Ga0116108_100015014
Arc-VirIMGVR_UViG_3300009519_000117-3300009519-Ga0116108_100015014
Identity
- Kingdom:
- archaea
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-71
D2
medium
residues 72-130
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.63 | 46.0 | 3.13e-01 | 78.0% | 81.4% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.61 | 44.0 | 3.78e-01 | 76.3% | 74.5% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 45.0 | 3.92e-01 | 91.5% | 52.5% |
| 2yu4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 47.0 | 4.09e-01 | 91.5% | 76.6% |
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.58 | 43.0 | 3.33e-01 | 81.4% | 81.0% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 44.0 | 4.22e-01 | 88.1% | 84.9% |
| 1wgrA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 39.0 | 3.56e-01 | 93.2% | 52.4% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 49.0 | 3.69e-01 | 100.0% | 65.8% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 43.0 | 4.31e-01 | 86.4% | 93.2% |
| 4qglA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 45.0 | 3.27e-01 | 93.2% | 78.7% |
| 5feyA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 43.0 | 3.99e-01 | 88.1% | 78.2% |
| 2wcyA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.55 | 38.0 | 3.58e-01 | 76.3% | 57.3% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.53e-01 | 96.6% | 54.7% |
| 1w8kA02 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.52 | 40.0 | 3.37e-01 | 91.5% | 47.3% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 41.0 | 4.11e-01 | 93.2% | 92.1% |
| 1chcA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 39.0 | 3.84e-01 | 89.8% | 83.8% |
| 2d44A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 2.74e-01 | 96.6% | 86.9% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3897441 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.74 | 56.0 | 5.45e-01 | 88.1% | 73.8% |
| 3880660 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.73 | 55.0 | 5.17e-01 | 86.4% | 67.1% |
| 3999651 | 904.1.1.14 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › SNAPC3 | 0.71 | 59.0 | 5.71e-01 | 89.8% | 89.2% |
| 3391334 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 46.0 | 5.25e-01 | 71.2% | 100.0% |
| 3189999 | 376.1.2.44 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › Vfa1 | 0.68 | 47.0 | 5.05e-01 | 74.6% | 86.0% |
| 3385376 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 57.0 | 4.57e-01 | 98.3% | 49.6% |
| 3509315 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.66 | 57.0 | 4.22e-01 | 96.6% | 38.1% |
| 3782443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 56.0 | 4.16e-01 | 98.3% | 40.0% |
| 3362593 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.65 | 49.0 | 4.04e-01 | 83.1% | 74.3% |
| 3178301 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 54.0 | 4.62e-01 | 98.3% | 71.0% |
| 3314956 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 47.0 | 5.02e-01 | 86.4% | 96.0% |
| 3306185 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 49.0 | 3.98e-01 | 96.6% | 44.2% |
| 4011099 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.62 | 50.0 | 4.86e-01 | 93.2% | 83.1% |
| 3342558 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 49.0 | 3.68e-01 | 96.6% | 34.2% |
| 3519254 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.61 | 51.0 | 3.69e-01 | 96.6% | 57.8% |
| 3299584 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 46.0 | 4.82e-01 | 88.1% | 100.0% |
| 3650976 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 49.0 | 4.43e-01 | 91.5% | 66.3% |
| None | — | 0.60 | 51.0 | 3.61e-01 | 96.6% | 54.7% | |
| 3809803 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 49.0 | 4.82e-01 | 91.5% | 93.8% |
| None | — | 0.60 | 51.0 | 3.74e-01 | 96.6% | 62.4% | |
| 4151528 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.60 | 45.0 | 4.66e-01 | 86.4% | 89.1% |
| 3706822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 47.0 | 4.89e-01 | 93.2% | 96.4% |
| 3724882 | 376.1.1.63 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › C1_2 | 0.60 | 48.0 | 4.96e-01 | 89.8% | 98.2% |
| 4126506 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.59 | 42.0 | 4.47e-01 | 84.7% | 88.0% |
| 3651500 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 42.0 | 4.56e-01 | 78.0% | 100.0% |
| 3391126 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.59 | 49.0 | 4.60e-01 | 93.2% | 77.3% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 43.0 | 4.23e-01 | 79.7% | 100.0% |
| 4000318 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.59 | 45.0 | 4.48e-01 | 83.1% | 88.3% |
| 3476439 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.58 | 47.0 | 4.40e-01 | 89.8% | 86.7% |
| 4946420 | 376.1.1.180 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII | 0.58 | 45.0 | 4.40e-01 | 86.4% | 89.2% |
| 3623715 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 45.0 | 4.45e-01 | 88.1% | 86.2% |
| 3722098 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.58 | 43.0 | 4.25e-01 | 83.1% | 84.6% |
| 3267279 | 1.1.2.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF28663 | 0.58 | 41.0 | 3.28e-01 | 74.6% | 89.2% |
| 5027983 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.57 | 47.0 | 3.15e-01 | 93.2% | 87.9% |
| 3918037 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.57 | 46.0 | 4.49e-01 | 89.8% | 95.4% |
| 3934067 | 377.1.1.12 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 | 0.57 | 46.0 | 3.83e-01 | 94.9% | 54.8% |
| 3813055 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.57 | 49.0 | 2.97e-01 | 98.3% | 31.7% |
| 4972257 | 304.104.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfolobus fructose-1,6-bisphosphatase-like › Sulfolobus fructose-1,6-bisphosphatase-like › FBPase_3 | 0.56 | 49.0 | 3.02e-01 | 100.0% | 37.9% |
| 6170 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.56 | 39.0 | 3.36e-01 | 94.9% | 44.0% |
| 3431728 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 43.0 | 4.39e-01 | 86.4% | 96.4% |
| 4334910 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.55 | 37.0 | 2.96e-01 | 71.2% | 61.6% |
| 3936711 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.55 | 42.0 | 3.92e-01 | 91.5% | 66.7% |
| 3512434 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.55 | 45.0 | 4.04e-01 | 94.9% | 100.0% |
| 4338085 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 36.0 | 3.99e-01 | 89.8% | 91.1% |
| 5082510 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 35.0 | 4.07e-01 | 89.8% | 100.0% |
| 3937508 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 42.0 | 3.92e-01 | 91.5% | 100.0% |
| 3579910 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.53 | 42.0 | 4.22e-01 | 89.8% | 90.0% |
| 3235878 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 44.0 | 3.82e-01 | 98.3% | 86.0% |
| 4466102 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.52 | 37.0 | 2.70e-01 | 84.7% | 25.9% |
| 3627027 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 31.0 | 3.43e-01 | 93.2% | 82.5% |
| 5000735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 2.81e-01 | 89.8% | 27.4% |
| 4505111 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 40.0 | 4.17e-01 | 88.1% | 100.0% |
| 4344487 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 35.0 | 2.63e-01 | 88.1% | 26.1% |
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.50 | 34.0 | 2.57e-01 | 88.1% | 25.3% |