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IMGVR_UViG_3300009519_000117-3300009519-Ga0116108_100015025
Arc-VirIMGVR_UViG_3300009519_000117-3300009519-Ga0116108_100015025
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
rep: MW960030.1__QWY82978.1__X__00024__D5-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02195.27 best | ParB_N | 63.8 | 2.10e-17 | 100.0% | 71.8% |
D2
medium
residues 95-177_200-230
Domain cluster:
rep: OM049504.1__UIS65450.1__X__00022__D83-194
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6s6hA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.80 | 63.0 | 6.45e-01 | 83.3% | 84.4% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.74 | 56.0 | 6.07e-01 | 84.2% | 93.8% |
| 3mkzN00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 51.0 | 5.19e-01 | 93.9% | 94.5% |
| 3vwbA00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 49.0 | 4.89e-01 | 93.9% | 94.8% |
| 4ae4A00 | 1.20.120.1920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UBAP1 SOUBA domain | 0.55 | 40.0 | 4.09e-01 | 76.3% | 90.4% |
| 4qiqA00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 41.0 | 2.78e-01 | 84.2% | 74.5% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 36.0 | 3.42e-01 | 74.6% | 74.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5073613 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.82 | 63.0 | 6.21e-01 | 81.6% | 75.8% |
| 3944883 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.70 | 55.0 | 5.84e-01 | 83.3% | 94.0% |
| 5032172 | 101.1.1.251 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB | 0.70 | 55.0 | 5.53e-01 | 83.3% | 82.6% |
| 4663216 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 54.0 | 5.54e-01 | 86.0% | 88.2% |
| 3979277 | 101.1.1.44 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ParB | 0.52 | 46.0 | 4.50e-01 | 96.5% | 91.2% |