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IMGVR_UViG_3300009519_000117-3300009519-Ga0116108_10001505

Arc-Vir

IMGVR_UViG_3300009519_000117-3300009519-Ga0116108_10001505

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-34_54-91
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.73 42.0 5.13e-01 94.4% 95.3%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.70 39.0 2.86e-01 95.8% 20.5%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.68 47.0 4.12e-01 98.6% 47.3%
4nkbB02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.67 35.0 3.29e-01 94.4% 40.0%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.65 37.0 3.77e-01 98.6% 56.5%
3kifD00 2.20.25.650 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like 0.64 40.0 3.70e-01 95.8% 49.5%
1tl2A00 2.115.10.10 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Tachylectin 2 0.64 41.0 2.84e-01 95.8% 20.0%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.61 43.0 3.41e-01 100.0% 35.3%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 37.0 3.23e-01 97.2% 40.0%
5z42A00 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.58 51.0 4.51e-01 97.2% 88.2%
4j2gA00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.56 43.0 3.19e-01 84.7% 86.1%
3kdgB01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.56 48.0 4.47e-01 97.2% 90.3%
3vn5A02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 43.0 3.25e-01 86.1% 94.6%
2xvlA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.53 42.0 2.95e-01 86.1% 92.3%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.65e-01 94.4% 57.1%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 43.0 2.90e-01 90.3% 53.4%
1nyrA03 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 36.0 2.38e-01 70.8% 19.6%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 36.0 3.16e-01 72.2% 96.3%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.72e-01 86.1% 24.2%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 42.0 3.51e-01 90.3% 76.9%
2rpbA00 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.52 39.0 3.42e-01 81.9% 86.7%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 2.89e-01 100.0% 22.6%
7ekqA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 36.0 2.69e-01 75.0% 50.0%
2f7lA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.50 30.0 2.89e-01 93.1% 47.1%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 37.0 3.60e-01 79.2% 87.7%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3709449 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 41.0 2.65e-01 97.2% 13.6%
3964082 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.72 41.0 3.23e-01 94.4% 29.3%
4995145 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.70 40.0 3.82e-01 98.6% 48.2%
3745132 9.8.1.1 beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc 0.69 48.0 3.95e-01 98.6% 40.8%
3576508 234.3.1.0 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.68 38.0 3.88e-01 98.6% 57.1%
3894438 5.1.4.73 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N 0.67 39.0 2.37e-01 98.6% 8.4%
3928477 77.3.1.4 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 0.64 39.0 2.84e-01 93.1% 22.1%
3511972 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.60 46.0 4.16e-01 83.3% 85.0%
4084582 4337.1.1.1 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C 0.60 50.0 4.69e-01 93.1% 93.3%
3407288 5.1.4.433 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS3_N 0.58 50.0 3.07e-01 95.8% 21.6%
5005139 4337.1.1.1 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C 0.58 51.0 4.25e-01 98.6% 76.8%
4049898 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.57 40.0 2.69e-01 75.0% 69.2%
3377868 206.1.1.28 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Haspin_kinase 0.57 46.0 3.01e-01 91.7% 97.4%
4979972 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.33e-01 98.6% 41.5%
5007064 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.56 40.0 4.03e-01 97.2% 73.3%
4028413 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 43.0 2.72e-01 97.2% 16.5%
4937854 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 48.0 3.21e-01 98.6% 31.2%
3271948 4337.1.1.0 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain 0.54 47.0 4.20e-01 98.6% 89.7%
4474942 4337.1.1.0 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain 0.54 45.0 4.53e-01 94.4% 96.0%
4646974 4337.1.1.1 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C 0.54 47.0 4.20e-01 98.6% 90.5%
4457756 4337.1.1.1 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C 0.54 47.0 4.07e-01 98.6% 92.9%
4122616 4337.1.1.0 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain 0.54 45.0 4.15e-01 94.4% 90.5%
4015815 3887.2.1.0 a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 0.54 45.0 3.46e-01 98.6% 51.4%
3502859 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 40.0 2.67e-01 98.6% 20.4%
None 0.53 44.0 3.72e-01 93.1% 82.3%
3242469 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 2.83e-01 100.0% 26.7%
4946187 241.6.1.0 a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits 0.53 41.0 3.50e-01 87.5% 84.8%
5083619 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.52 37.0 2.97e-01 73.6% 62.9%
3848556 5.1.4.417 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › KNTC1_N 0.52 46.0 2.90e-01 100.0% 23.8%
3620886 5.1.4.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.51 45.0 2.75e-01 98.6% 15.1%
3700773 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.51 41.0 3.20e-01 93.1% 92.2%
5075473 241.6.1.2 a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › ARPC4 0.51 40.0 3.26e-01 91.7% 59.4%
3744348 5.1.4.331 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30861 0.51 44.0 2.67e-01 98.6% 29.9%
4284025 206.1.2.4 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.51 43.0 2.96e-01 94.4% 37.6%
3180087 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 36.0 2.41e-01 76.4% 52.3%
D2 medium residues 92-143
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.88 64.0 4.00e-01 96.2% 15.9%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.73 56.0 4.43e-01 84.6% 47.3%
5ejrA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 52.0 4.61e-01 80.8% 51.2%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.69 54.0 3.86e-01 88.5% 36.0%
4bs9A01 3.90.930.60 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.68 50.0 4.21e-01 82.7% 84.2%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 51.0 3.84e-01 84.6% 32.8%
4v0bA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.66 52.0 5.00e-01 100.0% 76.2%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.65 51.0 3.91e-01 86.5% 81.4%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 53.0 4.50e-01 96.2% 59.3%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.65 57.0 3.93e-01 100.0% 33.5%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 43.0 4.14e-01 84.6% 58.7%
2c9oB02 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.64 49.0 3.93e-01 86.5% 54.0%
5x7qA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.63 47.0 3.09e-01 80.8% 38.1%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 48.0 3.84e-01 84.6% 43.6%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 48.0 3.61e-01 84.6% 71.6%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.62 45.0 2.86e-01 78.8% 31.4%
2p6rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 52.0 3.61e-01 100.0% 93.4%
6ro0B01 3.10.40.10 Alpha Beta › Roll › Pertussis Toxin; Chain B, domain 1 › Aerolysin/Pertussis toxin (APT), N-terminal domain 0.62 42.0 3.68e-01 98.1% 44.2%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 3.36e-01 76.9% 34.9%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 47.0 3.57e-01 84.6% 40.0%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.61 41.0 2.51e-01 71.2% 40.1%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 47.0 4.37e-01 98.1% 65.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 46.0 3.67e-01 86.5% 84.5%
5dn8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 39.0 2.82e-01 71.2% 20.9%
3rc2A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 43.0 2.92e-01 76.9% 82.1%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.60 42.0 3.45e-01 76.9% 44.9%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 44.0 4.12e-01 84.6% 62.7%
8oqxA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 49.0 3.83e-01 92.3% 56.1%
4yi7A02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.60 44.0 2.90e-01 84.6% 45.4%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 41.0 3.32e-01 73.1% 39.4%
2h1qA01 3.30.390.100 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.59 51.0 3.90e-01 100.0% 77.3%
3lm2A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 51.0 4.24e-01 100.0% 71.1%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 3.46e-01 88.5% 47.1%
2b9wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.48e-01 100.0% 68.6%
4af1A02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.59 47.0 3.76e-01 98.1% 88.9%
5ly3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 49.0 3.38e-01 100.0% 60.6%
5kmpB00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.58 43.0 2.57e-01 82.7% 10.9%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 39.0 3.79e-01 84.6% 62.3%
2a6aB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 45.0 3.63e-01 96.2% 77.3%
1ndbA02 3.30.559.70 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 0.57 42.0 2.67e-01 82.7% 73.9%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 38.0 3.55e-01 82.7% 55.1%
5jicA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 45.0 3.21e-01 96.2% 75.8%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 3.88e-01 80.8% 71.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.50e-01 80.8% 53.4%
6gnaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.34e-01 100.0% 35.0%
1pguA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.72e-01 86.5% 43.4%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 41.0 2.96e-01 90.4% 95.8%
3kd9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 46.0 3.33e-01 100.0% 37.7%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 37.0 2.88e-01 73.1% 43.1%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.54 41.0 2.88e-01 88.5% 47.5%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 44.0 3.71e-01 100.0% 62.4%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 38.0 3.49e-01 78.8% 54.7%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.53 42.0 2.96e-01 94.2% 78.0%
1jtdB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.53 45.0 2.88e-01 100.0% 96.7%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 42.0 3.48e-01 100.0% 55.8%
4eeeA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.48e-01 98.1% 89.6%
2ywlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 3.07e-01 96.2% 60.5%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 42.0 3.13e-01 100.0% 50.0%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.52 42.0 2.91e-01 100.0% 40.2%
1u2kA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.52 42.0 3.23e-01 92.3% 84.4%
3s2kB01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 40.0 2.58e-01 90.4% 72.5%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 42.0 3.51e-01 100.0% 62.5%
2z1cB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.46e-01 82.7% 95.9%
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.51 42.0 3.47e-01 100.0% 59.6%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 40.0 3.61e-01 92.3% 82.3%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.50 35.0 3.53e-01 82.7% 73.7%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 42.0 2.75e-01 100.0% 48.3%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
142171 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.88 64.0 4.00e-01 96.2% 15.9%
5061930 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.79 63.0 5.16e-01 88.5% 55.8%
5000498 896.1.1.1 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.78 66.0 6.32e-01 94.2% 83.3%
4128954 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.77 59.0 5.30e-01 84.6% 60.0%
4322675 220.1.1.121 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.75 58.0 4.52e-01 84.6% 41.8%
4963351 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 61.0 4.68e-01 92.3% 49.2%
3785514 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 62.0 4.65e-01 100.0% 40.0%
4393186 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.72 60.0 5.66e-01 100.0% 76.9%
3255034 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 62.0 4.63e-01 100.0% 47.4%
3548499 220.1.1.48 beta barrels › PH domain-like › PH domain-like › PH domain-like › Jak1_Phl 0.71 60.0 4.39e-01 98.1% 38.7%
5002402 3153.1.1.0 a+b two layers › PipX › PipX › PipX 0.69 60.0 5.24e-01 100.0% 65.3%
4545531 220.1.1.255 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.69 57.0 5.01e-01 98.1% 61.3%
1414921 220.1.1.12 beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 0.69 57.0 4.08e-01 98.1% 31.8%
3603731 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 55.0 4.17e-01 94.2% 85.7%
4592530 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.68 57.0 5.39e-01 98.1% 78.5%
3605401 4263.2.1.0 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.68 56.0 4.81e-01 98.1% 82.2%
3267918 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 53.0 5.22e-01 94.2% 85.5%
4942943 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.67 56.0 4.48e-01 96.2% 88.2%
2491473 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 4.78e-01 96.2% 97.8%
3616888 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 56.0 3.52e-01 98.1% 18.0%
4276957 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.66 44.0 4.42e-01 82.7% 67.3%
5028466 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.66 48.0 3.82e-01 82.7% 75.8%
4974477 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.66 48.0 4.03e-01 78.8% 45.6%
3265309 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.66 54.0 3.99e-01 94.2% 55.6%
4307219 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.65 46.0 4.58e-01 86.5% 72.7%
5044986 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 57.0 4.78e-01 100.0% 57.8%
4596531 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.64 52.0 4.86e-01 100.0% 71.4%
3386854 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 52.0 3.55e-01 92.3% 90.2%
5039029 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.64 47.0 4.05e-01 82.7% 56.7%
3579123 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 53.0 3.33e-01 100.0% 16.6%
3408101 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.63 47.0 3.61e-01 84.6% 70.4%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 46.0 3.31e-01 78.8% 44.0%
5041307 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 50.0 3.25e-01 92.3% 48.1%
3783181 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 47.0 3.73e-01 82.7% 82.7%
5063089 2484.1.1.39 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.62 50.0 3.22e-01 100.0% 19.6%
4986395 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.62 44.0 2.91e-01 75.0% 79.5%
4532648 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.62 42.0 3.48e-01 71.2% 45.5%
None 0.61 48.0 3.09e-01 88.5% 68.6%
3922240 3755.3.1.321 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WHAMM-JMY_N 0.61 45.0 3.67e-01 84.6% 90.0%
3786564 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 49.0 3.19e-01 98.1% 96.0%
2417931 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 52.0 3.28e-01 98.1% 83.3%
4995072 101.41.1.0 alpha arrays › HTH › MRB1590 C-terminal domain › MRB1590 C-terminal domain 0.59 45.0 3.80e-01 88.5% 82.0%
3603860 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.59 48.0 3.23e-01 94.2% 84.3%
3451730 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 42.0 3.92e-01 80.8% 65.7%
3702140 2003.1.2.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › SE 0.58 46.0 2.74e-01 88.5% 20.0%
3572060 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.58 45.0 3.62e-01 92.3% 80.8%
4260682 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 47.0 3.34e-01 94.2% 63.2%
3606041 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 42.0 2.72e-01 80.8% 28.3%
3646226 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.58 44.0 3.89e-01 84.6% 58.7%
3220833 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.58 46.0 3.06e-01 100.0% 23.6%
4969848 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.58 39.0 3.13e-01 73.1% 82.5%
3709516 2004.1.1.427 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.57 46.0 3.49e-01 100.0% 34.0%
3502952 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.57 41.0 3.55e-01 84.6% 62.0%
5017428 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.57 49.0 2.88e-01 100.0% 60.3%
1238016 5.1.4.20 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Glu_cyclase_2 0.57 44.0 2.96e-01 88.5% 58.5%
3648544 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 41.0 3.32e-01 80.8% 45.5%
3235404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 47.0 3.07e-01 98.1% 38.8%
1280955 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 40.0 3.84e-01 78.8% 65.6%
3289443 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 48.0 2.92e-01 100.0% 73.1%
2804177 2003.1.2.60 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, NAD_binding_8 0.55 45.0 3.06e-01 96.2% 83.7%
5017154 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 42.0 3.21e-01 86.5% 86.7%
3211395 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.55 42.0 2.65e-01 86.5% 76.7%
4069753 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.55 45.0 3.50e-01 100.0% 65.2%
3215840 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 49.0 3.14e-01 100.0% 28.1%
3231700 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 45.0 2.91e-01 100.0% 20.1%
3418546 2003.1.2.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase, Pyr_redox_2, NAD_binding_8 0.54 47.0 2.74e-01 100.0% 79.2%
5027238 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.54 43.0 3.22e-01 88.5% 39.3%
5064667 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.54 39.0 2.51e-01 78.8% 75.0%
4427469 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.54 44.0 3.43e-01 100.0% 46.7%
4213613 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.53 43.0 3.57e-01 100.0% 57.3%
2241 5.1.4.44 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 0.53 45.0 2.88e-01 100.0% 96.7%
3215471 5.1.4.382 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 0.52 44.0 2.66e-01 100.0% 72.6%
3740923 4.1.1.107 beta barrels › SH3 › SH3 › SH3 › XRN1_D1 0.52 42.0 3.01e-01 94.2% 57.2%
3688923 2.1.1.89 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.51 39.0 3.61e-01 90.4% 76.0%
3707403 5.1.4.382 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 0.51 43.0 2.63e-01 100.0% 74.1%
5078256 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.50 42.0 2.87e-01 96.2% 63.1%