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IMGVR_UViG_3300009519_000267-3300009519-Ga0116108_10010191
Arc-VirIMGVR_UViG_3300009519_000267-3300009519-Ga0116108_10010191
Identity
- Kingdom:
- archaea
Quality
96.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-141
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00248.28 best | Aldo_ket_red | 33.9 | 2.50e-08 | 94.9% | 42.1% |
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ovqA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.84 | 78.0 | 5.83e-01 | 97.1% | 50.7% |
| 3erpA01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.82 | 78.0 | 5.87e-01 | 100.0% | 47.5% |
| 4wghA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.81 | 73.0 | 5.57e-01 | 96.4% | 45.6% |
| 1pz1A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.80 | 75.0 | 5.49e-01 | 98.5% | 48.2% |
| 1ynpB01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.80 | 73.0 | 5.56e-01 | 96.4% | 47.1% |
| 1xi3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 42.0 | 3.63e-01 | 83.9% | 40.1% |
| 6gs8A01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.69 | 64.0 | 4.92e-01 | 99.3% | 47.3% |
| 3tlqA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.68 | 48.0 | 3.95e-01 | 81.8% | 41.5% |
| 1fhvA01 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 45.0 | 3.95e-01 | 84.7% | 46.0% |
| 4eyeA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 37.0 | 3.57e-01 | 73.0% | 46.2% |
| 2o7sA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 47.0 | 3.96e-01 | 84.7% | 42.1% |
| 4ac9C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 45.0 | 4.09e-01 | 75.9% | 50.8% |
| 2ekcB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 46.0 | 3.69e-01 | 83.2% | 38.1% |
| 5v1qB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 52.0 | 4.03e-01 | 84.7% | 43.4% |
| 6eqoA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 40.0 | 3.50e-01 | 75.2% | 41.9% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 50.0 | 3.94e-01 | 84.7% | 39.8% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 50.0 | 4.26e-01 | 84.7% | 52.3% |
| 1o69A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 41.0 | 3.42e-01 | 84.7% | 38.2% |
| 2q09A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 50.0 | 3.89e-01 | 84.7% | 39.8% |
| 1eamA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 34.0 | 2.69e-01 | 72.3% | 24.6% |
| 2yweA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 39.0 | 3.76e-01 | 72.3% | 53.1% |
| 3nzpB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.62 | 51.0 | 4.08e-01 | 86.9% | 52.3% |
| 3islA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.62 | 40.0 | 3.28e-01 | 84.7% | 36.2% |
| 2dy3C02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.62 | 46.0 | 4.00e-01 | 81.8% | 51.4% |
| 4f2gA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.61 | 34.0 | 3.40e-01 | 71.5% | 52.1% |
| 1sulB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 44.0 | 3.90e-01 | 75.9% | 52.8% |
| 5facA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.59 | 46.0 | 3.91e-01 | 81.8% | 52.0% |
| 2pd2A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.59 | 36.0 | 4.03e-01 | 72.3% | 77.8% |
| 4bjhB02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.58 | 39.0 | 3.88e-01 | 98.5% | 65.3% |
| 6g80B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 40.0 | 3.47e-01 | 73.0% | 44.3% |
| 2jisB02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 42.0 | 3.40e-01 | 84.7% | 40.7% |
| 3b1dA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 42.0 | 3.53e-01 | 84.7% | 45.3% |
| 3vylA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 45.0 | 3.55e-01 | 86.9% | 44.4% |
| 3f9tA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 43.0 | 3.42e-01 | 79.6% | 52.5% |
| 6pnzA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.56 | 37.0 | 3.67e-01 | 100.0% | 63.4% |
| 1z7dA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 43.0 | 3.60e-01 | 80.3% | 57.1% |
| 7uvpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.49e-01 | 84.7% | 63.0% |
| 1ozhA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.54 | 32.0 | 3.10e-01 | 78.1% | 50.0% |
| 1y5lA02 | 3.40.50.12440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 2.81e-01 | 100.0% | 85.7% |
| 1lc5A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 37.0 | 3.17e-01 | 94.2% | 43.6% |
| 3ibsA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.53 | 38.0 | 3.36e-01 | 75.9% | 51.0% |
| 2bm8B02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 35.0 | 3.28e-01 | 84.7% | 53.5% |
| 2ihtA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 31.0 | 3.00e-01 | 78.8% | 48.2% |
| 1pvdA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 30.0 | 2.94e-01 | 78.1% | 48.1% |
| 1r6xA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 38.0 | 3.30e-01 | 76.6% | 79.8% |
| 3b46A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 38.0 | 3.17e-01 | 96.4% | 42.7% |
| 2g07A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 34.0 | 3.08e-01 | 77.4% | 49.7% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953174 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.97 | 94.0 | 6.90e-01 | 100.0% | 45.0% |
| 4954492 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.95 | 92.0 | 6.68e-01 | 100.0% | 43.2% |
| 4952393 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.90 | 84.0 | 6.42e-01 | 97.8% | 47.5% |
| 4978502 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.87 | 68.0 | 5.35e-01 | 98.5% | 43.1% |
| 4119939 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.82 | 75.0 | 5.61e-01 | 96.4% | 47.5% |
| 4933002 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.82 | 72.0 | 5.56e-01 | 92.7% | 47.1% |
| 3593401 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.81 | 73.0 | 5.56e-01 | 96.4% | 45.3% |
| 3420108 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.80 | 75.0 | 5.55e-01 | 100.0% | 47.6% |
| 3977834 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.80 | 72.0 | 5.50e-01 | 96.4% | 45.3% |
| 4015076 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.79 | 72.0 | 5.70e-01 | 97.1% | 56.6% |
| 3945789 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.79 | 71.0 | 5.18e-01 | 94.9% | 46.3% |
| 4271445 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.78 | 71.0 | 5.15e-01 | 95.6% | 42.1% |
| 3191219 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.77 | 68.0 | 5.44e-01 | 100.0% | 50.6% |
| 5081276 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.77 | 72.0 | 5.44e-01 | 100.0% | 46.2% |
| 3725341 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.76 | 70.0 | 5.21e-01 | 98.5% | 53.0% |
| 5039285 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.75 | 68.0 | 4.84e-01 | 96.4% | 42.7% |
| 5049401 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.74 | 66.0 | 5.05e-01 | 94.2% | 46.0% |
| 95373 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.72 | 52.0 | 4.35e-01 | 83.9% | 44.9% |
| 4412475 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.71 | 46.0 | 4.06e-01 | 75.9% | 46.2% |
| 4522770 | 2007.19.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Glycerate kinase I (Pfam 02595) domain I › Glycerate kinase I (Pfam 02595) domain I › Gly_kinase | 0.66 | 39.0 | 3.80e-01 | 75.2% | 51.6% |
| None | — | 0.64 | 43.0 | 3.40e-01 | 84.7% | 33.6% | |
| 3695626 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.63 | 47.0 | 3.53e-01 | 75.9% | 37.7% |
| 4937603 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 51.0 | 3.52e-01 | 86.1% | 45.6% |
| 3677226 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.63 | 53.0 | 4.47e-01 | 88.3% | 80.7% |
| 3723094 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.62 | 33.0 | 3.29e-01 | 72.3% | 46.9% |
| None | — | 0.62 | 32.0 | 3.05e-01 | 70.1% | 40.0% | |
| 3603209 | 2002.1.1.113 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CdhD | 0.62 | 50.0 | 3.91e-01 | 85.4% | 44.2% |
| 4863091 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.61 | 42.0 | 3.77e-01 | 73.0% | 52.2% |
| 5029149 | 2007.15.1.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › ThsB_TIR | 0.61 | 36.0 | 3.77e-01 | 71.5% | 63.2% |
| 4330589 | 2004.1.1.422 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, RsgA_GTPase | 0.61 | 45.0 | 3.93e-01 | 75.9% | 52.8% |
| 4301424 | 2003.1.4.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › CO_dh | 0.61 | 32.0 | 2.98e-01 | 70.1% | 39.3% |
| 4862375 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 46.0 | 3.39e-01 | 83.2% | 40.8% |
| 4943941 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.59 | 34.0 | 3.06e-01 | 72.3% | 41.1% |
| 4987242 | 2003.1.4.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › CO_dh | 0.58 | 31.0 | 3.01e-01 | 70.8% | 43.2% |
| 3177706 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.58 | 35.0 | 3.01e-01 | 81.0% | 37.1% |
| 4501010 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.58 | 46.0 | 3.81e-01 | 83.9% | 71.5% |
| 4127389 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.57 | 45.0 | 3.91e-01 | 84.7% | 78.1% |
| 4985920 | 7545.1.1.2 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrH | 0.57 | 36.0 | 3.96e-01 | 75.2% | 78.2% |
| 3311242 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.56 | 37.0 | 4.18e-01 | 73.0% | 86.7% |
| 4532128 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.56 | 44.0 | 3.96e-01 | 83.9% | 80.9% |
| 3989337 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.56 | 46.0 | 3.81e-01 | 88.3% | 89.0% |
| 4668778 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.55 | 47.0 | 3.56e-01 | 92.0% | 86.3% |
| 4999245 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.52 | 48.0 | 3.71e-01 | 100.0% | 54.7% |
| 3944356 | 101.1.10.42 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF4158 | 0.52 | 36.0 | 4.13e-01 | 100.0% | 98.0% |
| 4880541 | 2003.1.4.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › CO_dh | 0.52 | 32.0 | 3.02e-01 | 70.8% | 50.3% |
| 4664422 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.50 | 36.0 | 3.66e-01 | 92.0% | 74.1% |
| 5049446 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.50 | 47.0 | 3.57e-01 | 100.0% | 52.0% |
D2
high
residues 161-228
Domain cluster:
rep: IMGVR_UViG_3300018407_000329-3300018407-Ga0187900_10055683__D321-386
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13746.12 best | Fer4_18 | 27.2 | 5.10e-06 | 89.7% | 49.1% |
| PF13534.12 | Fer4_17 | 31.3 | 3.50e-07 | 75.0% | 70.5% |
| PF00037.33 | Fer4 | 25.2 | 1.50e-05 | 32.4% | 66.7% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bs2B02 | 1.10.1060.10 | Mainly Alpha › Orthogonal Bundle › Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 › Alpha-helical ferredoxin | 0.77 | 65.0 | 5.34e-01 | 100.0% | 51.6% |
| 1zoyB02 | 1.10.1060.10 | Mainly Alpha › Orthogonal Bundle › Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 › Alpha-helical ferredoxin | 0.77 | 63.0 | 5.07e-01 | 100.0% | 46.6% |
| 2yhcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 41.0 | 2.99e-01 | 100.0% | 22.5% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.62 | 42.0 | 3.46e-01 | 72.1% | 67.4% |
| 5nnpE01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 42.0 | 2.59e-01 | 98.5% | 10.6% |
| 3l2oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.60 | 34.0 | 3.21e-01 | 89.7% | 42.0% |
| 8g0lB01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 45.0 | 2.87e-01 | 100.0% | 15.0% |
| 4uqxA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 37.0 | 3.40e-01 | 98.5% | 48.3% |
| 5aioA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 37.0 | 2.91e-01 | 100.0% | 27.7% |
| 2r5sA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 39.0 | 3.71e-01 | 98.5% | 55.7% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.57 | 45.0 | 4.36e-01 | 100.0% | 77.3% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 4.12e-01 | 92.6% | 84.5% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 44.0 | 4.34e-01 | 100.0% | 82.7% |
| 1bcrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 37.0 | 2.58e-01 | 100.0% | 20.1% |
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 33.0 | 3.19e-01 | 100.0% | 49.4% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 34.0 | 3.41e-01 | 100.0% | 65.2% |
| 3dpjF00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 42.0 | 3.24e-01 | 100.0% | 73.4% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.51 | 42.0 | 4.07e-01 | 100.0% | 81.9% |
| 3a8tA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.51 | 37.0 | 3.17e-01 | 77.9% | 80.2% |
| 4mduA02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.50 | 41.0 | 3.98e-01 | 100.0% | 89.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016497 | 187.1.1.4 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_17 | 0.89 | 73.0 | 6.91e-01 | 100.0% | 73.8% |
| 4952394 | 187.1.1.2 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_9 | 0.89 | 80.0 | 7.17e-01 | 100.0% | 72.2% |
| 5052376 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.89 | 79.0 | 7.22e-01 | 100.0% | 75.3% |
| 4964753 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.80 | 68.0 | 5.41e-01 | 100.0% | 47.4% |
| None | — | 0.80 | 57.0 | 4.97e-01 | 100.0% | 51.0% | |
| 4967797 | 187.1.1.9 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_7 | 0.78 | 55.0 | 5.60e-01 | 98.5% | 76.9% |
| 4449853 | 187.1.1.10 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4, Fer4_7 | 0.77 | 55.0 | 4.82e-01 | 100.0% | 51.0% |
| 3175687 | 187.1.1.4 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_17 | 0.77 | 63.0 | 5.14e-01 | 100.0% | 47.7% |
| 4986000 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.77 | 58.0 | 4.80e-01 | 100.0% | 45.8% |
| 5005774 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.77 | 54.0 | 5.25e-01 | 100.0% | 66.7% |
| None | — | 0.76 | 54.0 | 5.24e-01 | 100.0% | 68.0% | |
| 4348031 | 187.1.1.9 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_7 | 0.76 | 54.0 | 4.92e-01 | 100.0% | 56.7% |
| 4936831 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.76 | 54.0 | 5.35e-01 | 100.0% | 72.9% |
| 51390 | 187.1.1.0 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin | 0.75 | 62.0 | 5.04e-01 | 100.0% | 47.4% |
| 4981167 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.75 | 57.0 | 5.21e-01 | 100.0% | 62.2% |
| 4592276 | 205.1.1.33 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 | 0.74 | 53.0 | 5.16e-01 | 100.0% | 69.3% |
| None | — | 0.74 | 55.0 | 4.80e-01 | 100.0% | 52.4% | |
| 5002006 | 187.1.1.9 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_7 | 0.73 | 51.0 | 5.01e-01 | 100.0% | 68.0% |
| 5037025 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.72 | 51.0 | 4.37e-01 | 100.0% | 46.4% |
| 4996875 | 187.1.1.3 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_10 | 0.71 | 55.0 | 4.97e-01 | 100.0% | 62.2% |
| 3386362 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.70 | 52.0 | 4.84e-01 | 100.0% | 62.2% |
| 5050243 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.69 | 55.0 | 5.09e-01 | 100.0% | 66.7% |
| 3720578 | 109.4.1.888 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N | 0.68 | 44.0 | 3.25e-01 | 98.5% | 25.0% |
| None | — | 0.63 | 39.0 | 3.23e-01 | 94.1% | 33.6% | |
| 4933847 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.62 | 53.0 | 4.63e-01 | 100.0% | 63.6% |
| 1859788 | 109.4.1.888 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N | 0.62 | 40.0 | 3.40e-01 | 100.0% | 40.5% |
| 3429131 | 3932.1.1.4 ↗ | alpha bundles › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › TPR_19 | 0.60 | 37.0 | 3.84e-01 | 98.5% | 64.6% |
| 3580347 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 50.0 | 4.40e-01 | 100.0% | 78.1% |
| 3306371 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 45.0 | 3.12e-01 | 100.0% | 22.6% |
| 3436176 | 532.2.1.13 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › PF26740 | 0.55 | 45.0 | 4.42e-01 | 100.0% | 88.0% |
| 3409823 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.55 | 43.0 | 3.91e-01 | 88.2% | 87.4% |
| 3476446 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.55 | 32.0 | 2.97e-01 | 88.2% | 41.1% |
| 3435258 | 109.7.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › TPR_16 | 0.54 | 34.0 | 3.28e-01 | 98.5% | 50.6% |
| None | — | 0.54 | 35.0 | 3.54e-01 | 100.0% | 66.2% | |
| 3994307 | 109.4.1.1223 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOP1B | 0.52 | 42.0 | 3.47e-01 | 97.1% | 47.4% |
| 3553088 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.52 | 38.0 | 2.98e-01 | 100.0% | 32.9% |