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IMGVR_UViG_3300009548_000290-3300009548-Ga0116107_10077506
Arc-VirIMGVR_UViG_3300009548_000290-3300009548-Ga0116107_10077506
Identity
- Kingdom:
- archaea
Quality
81.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-46
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t07A00 | 1.10.3880.10 | Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX | 0.75 | 52.0 | 4.22e-01 | 72.7% | 44.4% |
| 1zx3A01 | 1.10.287.1020 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like | 0.73 | 51.0 | 4.09e-01 | 72.7% | 40.0% |
| 1tgoA05 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.71 | 61.0 | 4.12e-01 | 100.0% | 92.8% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.68 | 51.0 | 4.34e-01 | 100.0% | 48.1% |
| 6gc1A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 52.0 | 3.51e-01 | 100.0% | 85.9% |
| 2f2eA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 4.24e-01 | 97.7% | 80.2% |
| 3vygE00 | 1.10.472.20 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit | 0.57 | 49.0 | 3.41e-01 | 100.0% | 28.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3396048 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.78 | 56.0 | 3.56e-01 | 90.9% | 16.2% |
| 3403625 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 4.67e-01 | 72.7% | 95.0% |
| 3414017 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 51.0 | 4.57e-01 | 72.7% | 93.3% |
| 3696929 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 53.0 | 4.49e-01 | 75.0% | 82.9% |
| 4251057 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.71 | 57.0 | 4.05e-01 | 90.9% | 42.2% |
| 5081088 | 101.1.2.932 ↗ | alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc | 0.71 | 54.0 | 4.34e-01 | 81.8% | 68.7% |
| 1030601 | 3143.1.2.1 ↗ | alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein › Tenui_N | 0.70 | 61.0 | 3.83e-01 | 100.0% | 37.8% |
| 4951119 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.69 | 54.0 | 3.46e-01 | 100.0% | 17.0% |
| 3593371 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 53.0 | 4.61e-01 | 81.8% | 87.7% |
| 4091216 | 3844.2.1.2 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 | 0.69 | 55.0 | 3.53e-01 | 88.6% | 25.9% |
| 3297698 | 101.1.2.201 ↗ | alpha arrays › HTH › HTH › winged helix domain › MTR4-like_stalk | 0.68 | 50.0 | 3.82e-01 | 77.3% | 84.2% |
| 3887950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 51.0 | 4.59e-01 | 79.5% | 93.3% |
| 3972555 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 52.0 | 3.60e-01 | 90.9% | 76.5% |
| 3729428 | 101.1.2.60 ↗ | alpha arrays › HTH › HTH › winged helix domain › HA2_N | 0.67 | 53.0 | 4.56e-01 | 81.8% | 89.2% |
| 3204423 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 4.53e-01 | 79.5% | 88.3% |
| 3523432 | 509.1.1.10 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › HHD_RTEL1 | 0.67 | 52.0 | 4.01e-01 | 100.0% | 36.5% |
| 3361504 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 47.0 | 4.93e-01 | 84.1% | 80.0% |
| 3467707 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 52.0 | 3.24e-01 | 81.8% | 25.2% |
| 4994857 | 101.1.2.932 ↗ | alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc | 0.65 | 56.0 | 4.78e-01 | 95.5% | 85.7% |
| 5002796 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 4.59e-01 | 88.6% | 89.2% |
| 5043931 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 55.0 | 4.72e-01 | 95.5% | 70.0% |
| 4427696 | 3844.2.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG | 0.63 | 56.0 | 3.45e-01 | 100.0% | 24.2% |
| 3598777 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.62 | 46.0 | 3.15e-01 | 90.9% | 78.5% |
| 3797416 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.57 | 49.0 | 3.03e-01 | 100.0% | 15.6% |
| 5035909 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.57 | 51.0 | 3.33e-01 | 100.0% | 72.1% |
| 3643233 | 5.1.5.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF30506 | 0.51 | 38.0 | 2.25e-01 | 79.5% | 8.8% |