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IMGVR_UViG_3300009549_000172-3300009549-Ga0116137_100256315
Arc-VirIMGVR_UViG_3300009549_000172-3300009549-Ga0116137_100256315
Identity
- Kingdom:
- archaea
Quality
59.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-68
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k82A02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.77 | 66.0 | 4.94e-01 | 96.0% | 61.0% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.71 | 53.0 | 4.29e-01 | 80.0% | 89.4% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 38.0 | 3.86e-01 | 96.0% | 52.0% |
| 4egsA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 53.0 | 3.78e-01 | 82.0% | 92.5% |
| 4iejA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 48.0 | 4.17e-01 | 72.0% | 94.7% |
| 6t4hA03 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.69 | 61.0 | 4.15e-01 | 100.0% | 36.6% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 37.0 | 3.54e-01 | 86.0% | 45.9% |
| 3q23A08 | 1.20.140.110 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.64 | 56.0 | 3.97e-01 | 100.0% | 32.5% |
| 5z3mB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 52.0 | 3.68e-01 | 90.0% | 65.1% |
| 1ofcX04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 56.0 | 4.47e-01 | 100.0% | 52.1% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 36.0 | 3.12e-01 | 96.0% | 35.1% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.62 | 45.0 | 3.89e-01 | 78.0% | 71.6% |
| 7watB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 53.0 | 3.26e-01 | 98.0% | 21.4% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 41.0 | 3.61e-01 | 70.0% | 54.5% |
| 1u2pA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 48.0 | 3.43e-01 | 86.0% | 88.5% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.60 | 45.0 | 4.39e-01 | 88.0% | 75.0% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 41.0 | 3.55e-01 | 74.0% | 45.1% |
| 2r7rA08 | 1.20.120.1400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 46.0 | 3.86e-01 | 96.0% | 55.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3263074 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.77 | 51.0 | 4.49e-01 | 94.0% | 48.6% |
| 3928495 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.67 | 57.0 | 4.66e-01 | 98.0% | 76.8% |
| 4944726 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 50.0 | 4.68e-01 | 84.0% | 75.0% |
| 5003077 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.60 | 40.0 | 3.55e-01 | 70.0% | 55.7% |
| 4331899 | 1180.1.1.1 ↗ | alpha bundles › Flagellar biosynthetic protein FliP periplasmic domain › Flagellar biosynthetic protein FliP periplasmic domain › Flagellar biosynthetic protein FliP periplasmic domain › FliP | 0.58 | 52.0 | 3.66e-01 | 100.0% | 92.3% |
| 3496406 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 50.0 | 3.61e-01 | 100.0% | 35.6% |
| 5047233 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.56 | 40.0 | 3.93e-01 | 76.0% | 70.9% |
| 3957642 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 36.0 | 3.54e-01 | 74.0% | 65.5% |
| 3787643 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.16e-01 | 90.0% | 43.0% |