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IMGVR_UViG_3300009549_000172-3300009549-Ga0116137_100256317
Arc-VirIMGVR_UViG_3300009549_000172-3300009549-Ga0116137_100256317
Identity
- Kingdom:
- archaea
Quality
84.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-51
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dklA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 53.0 | 4.27e-01 | 70.6% | 46.7% |
| 1y9bA00 | 1.20.5.780 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.69 | 51.0 | 4.45e-01 | 82.4% | 56.8% |
| 2ga8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 46.0 | 2.77e-01 | 72.5% | 11.2% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.63 | 53.0 | 3.73e-01 | 96.1% | 66.5% |
| 2uytA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 47.0 | 3.10e-01 | 88.2% | 88.5% |
| 4p17A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.59 | 46.0 | 3.73e-01 | 90.2% | 92.7% |
| 3hz6A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 48.0 | 3.10e-01 | 92.2% | 87.9% |
| 3thpA02 | 2.60.120.1520 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 3.22e-01 | 82.4% | 89.5% |
| 3d1bB00 | 1.20.920.40 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.55 | 41.0 | 3.29e-01 | 80.4% | 93.5% |
| 1dp3A00 | 1.10.10.450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding | 0.53 | 37.0 | 3.63e-01 | 76.5% | 72.7% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 40.0 | 2.82e-01 | 92.2% | 70.9% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002222 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.92 | 64.0 | 5.34e-01 | 72.5% | 48.8% |
| 4927061 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.91 | 71.0 | 7.20e-01 | 82.4% | 88.0% |
| 5064918 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.91 | 66.0 | 6.95e-01 | 76.5% | 91.1% |
| 5077239 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.90 | 63.0 | 5.29e-01 | 72.5% | 48.8% |
| 5035172 | 101.1.11.31 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_8 | 0.89 | 64.0 | 5.87e-01 | 76.5% | 63.1% |
| 3963154 | 101.1.11.115 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Mb1296_C | 0.88 | 71.0 | 7.01e-01 | 86.3% | 94.4% |
| 4977121 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.87 | 61.0 | 6.71e-01 | 74.5% | 100.0% |
| 4938238 | 101.1.11.4 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD_antitoxin | 0.87 | 59.0 | 5.54e-01 | 70.6% | 63.3% |
| 5046436 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.86 | 69.0 | 6.31e-01 | 86.3% | 76.9% |
| 5056710 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.85 | 60.0 | 5.52e-01 | 74.5% | 61.5% |
| 4942364 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.85 | 62.0 | 3.78e-01 | 76.5% | 14.4% |
| 4797237 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.84 | 60.0 | 6.46e-01 | 76.5% | 90.7% |
| 3330005 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.82 | 59.0 | 6.27e-01 | 76.5% | 95.3% |
| 3955892 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.81 | 60.0 | 6.05e-01 | 78.4% | 80.0% |
| 5018588 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.80 | 58.0 | 5.55e-01 | 78.4% | 73.3% |
| 4058428 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 54.0 | 5.26e-01 | 72.5% | 69.1% |
| 4777285 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.78 | 52.0 | 5.92e-01 | 70.6% | 100.0% |
| 5029099 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.77 | 57.0 | 5.05e-01 | 80.4% | 54.7% |
| 4375217 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.75 | 55.0 | 4.70e-01 | 78.4% | 50.0% |
| 5028248 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.72 | 50.0 | 5.06e-01 | 72.5% | 74.0% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.72 | 54.0 | 5.37e-01 | 82.4% | 78.2% |
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.69 | 51.0 | 5.04e-01 | 82.4% | 81.8% |
| 3284090 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.65 | 53.0 | 3.41e-01 | 90.2% | 85.4% |
| 4311936 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.61 | 41.0 | 3.95e-01 | 78.4% | 60.0% |
| 4962083 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.61 | 51.0 | 3.25e-01 | 94.1% | 83.1% |
| 3499465 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.59 | 47.0 | 3.05e-01 | 92.2% | 88.2% |
| 4618490 | 148.1.3.326 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30394 | 0.58 | 42.0 | 3.61e-01 | 76.5% | 82.4% |
| 3695333 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.57 | 40.0 | 2.76e-01 | 76.5% | 38.0% |
| 4009213 | 103.4.1.22 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF30394 | 0.55 | 41.0 | 3.51e-01 | 82.4% | 75.6% |
| 3394383 | 101.6.1.1 ↗ | alpha arrays › HTH › Protein serine/threonine phosphatase 2C-C › Protein serine/threonine phosphatase 2C-C › PP2C_C | 0.55 | 40.0 | 3.66e-01 | 80.4% | 64.3% |
| 3628153 | 109.4.1.517 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N | 0.53 | 40.0 | 2.68e-01 | 88.2% | 71.0% |
| 5076184 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.52 | 45.0 | 2.85e-01 | 100.0% | 80.2% |