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IMGVR_UViG_3300009588_000226-3300009588-Ga0116232_11138423

Arc-Vir

IMGVR_UViG_3300009588_000226-3300009588-Ga0116232_11138423

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-57
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.81 70.0 6.67e-01 100.0% 94.0%
3ilvA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.78 68.0 4.00e-01 100.0% 13.8%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.31e-01 100.0% 58.7%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 4.74e-01 100.0% 36.6%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.07e-01 100.0% 54.7%
1fexA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 59.0 5.44e-01 100.0% 83.1%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.11e-01 100.0% 61.8%
2yusA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 54.0 5.09e-01 100.0% 71.7%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.01e-01 100.0% 66.7%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.56e-01 100.0% 60.8%
4uskA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.66 52.0 3.41e-01 88.1% 25.1%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.61 46.0 3.95e-01 85.7% 58.7%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 50.0 3.37e-01 100.0% 72.1%
3vmmA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 41.0 3.04e-01 95.2% 26.7%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036279 4156.1.1.7 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 0.93 84.0 5.37e-01 100.0% 23.3%
4928271 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 80.0 8.19e-01 95.2% 100.0%
3941666 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.91 80.0 6.54e-01 100.0% 55.4%
3946360 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 6.73e-01 100.0% 63.1%
3590474 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 6.08e-01 100.0% 48.2%
4927804 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 76.0 6.22e-01 100.0% 53.3%
4945040 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 79.0 6.99e-01 100.0% 70.0%
4944585 101.1.2.872 alpha arrays › HTH › HTH › winged helix domain › rve 0.89 79.0 6.98e-01 100.0% 70.0%
4008852 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.88 64.0 5.37e-01 78.6% 48.6%
4946654 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 77.0 6.85e-01 100.0% 70.0%
3899987 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.87 77.0 6.06e-01 100.0% 49.4%
5024512 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 7.04e-01 100.0% 86.0%
3984597 101.1.2.488 alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 0.85 74.0 5.78e-01 100.0% 71.1%
3987150 101.1.1.382 alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 0.84 74.0 7.03e-01 100.0% 86.0%
3988910 101.1.1.382 alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 0.84 73.0 7.21e-01 100.0% 95.6%
4494466 2484.1.1.231 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66, DDE_Tnp_IS66_C 0.84 74.0 4.52e-01 100.0% 17.6%
5074801 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 74.0 5.18e-01 100.0% 32.3%
5029219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 73.0 6.69e-01 100.0% 76.4%
3193121 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 70.0 6.45e-01 100.0% 72.7%
4938633 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 4.93e-01 100.0% 29.6%
3198205 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 5.51e-01 100.0% 44.2%
4950639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 71.0 4.72e-01 100.0% 24.4%
3391047 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 72.0 6.41e-01 100.0% 73.3%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.82 64.0 5.84e-01 100.0% 65.5%
3887965 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.82 69.0 6.43e-01 100.0% 76.4%
3878549 101.1.2.536 alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 0.82 69.0 6.42e-01 100.0% 76.4%
5044657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 68.0 6.09e-01 100.0% 66.7%
4008778 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 6.25e-01 100.0% 72.7%
4937493 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.80 64.0 5.77e-01 100.0% 63.3%
4085415 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.80 68.0 6.47e-01 95.2% 84.0%
3934874 101.1.1.396 alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor 0.79 67.0 6.20e-01 100.0% 76.4%
5074546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 5.24e-01 100.0% 50.6%
4167193 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.77 69.0 6.77e-01 100.0% 97.8%
3590551 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.77 67.0 6.40e-01 100.0% 88.0%
3983493 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.77 63.0 6.03e-01 100.0% 80.0%
3984964 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.76 63.0 5.27e-01 100.0% 53.3%
3519342 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.76 67.0 6.18e-01 100.0% 80.0%
5022630 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.76 67.0 4.05e-01 100.0% 15.7%
3602673 2004.1.1.1085 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30184 0.76 63.0 4.72e-01 100.0% 37.3%
3982775 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.76 66.0 5.90e-01 100.0% 70.0%
3981939 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.76 63.0 5.91e-01 100.0% 80.0%
5079733 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.33e-01 100.0% 57.3%
3400463 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 62.0 4.92e-01 100.0% 66.3%
4984725 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.75 66.0 4.18e-01 100.0% 70.1%
3617966 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 5.41e-01 100.0% 62.9%
3211251 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 61.0 5.82e-01 97.6% 80.0%
4958040 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.74 62.0 4.89e-01 100.0% 45.3%
3942167 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.74 64.0 5.74e-01 100.0% 71.7%
3901880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 5.32e-01 100.0% 63.1%
4975263 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.74 63.0 5.09e-01 100.0% 51.8%
4988081 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 5.20e-01 100.0% 62.9%
2325472 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.70 58.0 4.19e-01 100.0% 31.8%
4999433 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.70 58.0 5.60e-01 100.0% 86.0%
4263795 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.68 55.0 4.76e-01 100.0% 61.3%
3890613 101.1.2.698 alpha arrays › HTH › HTH › winged helix domain › PF27079 0.67 57.0 5.04e-01 100.0% 67.7%
3881313 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 4.84e-01 100.0% 67.7%
3793542 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 52.0 4.87e-01 100.0% 80.0%
4955367 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 4.63e-01 100.0% 62.9%
3737539 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.58 44.0 3.87e-01 100.0% 57.5%
4561525 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 44.0 3.90e-01 100.0% 77.3%
D2 high residues 60-164
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.92 62.0 6.88e-01 77.1% 83.7%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 63.0 6.37e-01 81.0% 75.2%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.86 67.0 6.73e-01 91.4% 79.2%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.86 68.0 6.79e-01 91.4% 80.4%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.86 52.0 6.55e-01 72.4% 100.0%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.86 75.0 5.56e-01 97.1% 40.7%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 78.0 5.96e-01 96.2% 79.1%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 56.0 6.00e-01 76.2% 77.2%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 53.0 5.50e-01 73.3% 69.1%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.83 73.0 5.09e-01 95.2% 31.7%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.83 63.0 5.52e-01 87.6% 56.6%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.82 60.0 6.10e-01 83.8% 77.5%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.82 72.0 5.47e-01 93.3% 48.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.81 66.0 6.46e-01 88.6% 79.5%
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.81 71.0 5.47e-01 93.3% 45.5%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 64.0 6.54e-01 86.7% 85.4%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 76.0 6.83e-01 100.0% 88.5%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.80 65.0 6.09e-01 87.6% 72.0%
4cgkA01 6.10.250.3150 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.79 74.0 5.68e-01 98.1% 74.8%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.79 72.0 5.02e-01 97.1% 46.5%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 53.0 5.59e-01 77.1% 75.0%
6p73A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.79 54.0 4.83e-01 70.5% 52.4%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 53.0 6.13e-01 77.1% 94.7%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 57.0 6.49e-01 77.1% 100.0%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 67.0 5.06e-01 96.2% 40.5%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 68.0 5.87e-01 94.3% 61.6%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.78 69.0 7.10e-01 96.2% 98.0%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.78 60.0 6.49e-01 91.4% 95.5%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.78 70.0 6.02e-01 97.1% 73.9%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.77 72.0 5.78e-01 100.0% 96.9%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 57.0 6.32e-01 80.0% 98.8%
1wdzA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 68.0 5.21e-01 96.2% 43.7%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 69.0 5.28e-01 96.2% 58.6%
4yjwA00 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.76 59.0 5.09e-01 80.0% 55.6%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 43.0 5.52e-01 72.4% 100.0%
2gl2B00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 65.0 6.47e-01 96.2% 90.8%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 54.0 5.59e-01 88.6% 79.0%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.75 61.0 6.31e-01 85.7% 97.9%
6q45G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.74 63.0 5.58e-01 89.5% 86.3%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.74 48.0 5.61e-01 96.2% 93.2%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 62.0 5.27e-01 87.6% 81.4%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.74 51.0 5.90e-01 74.3% 100.0%
1rx0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.74 55.0 4.83e-01 90.5% 53.5%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.73 67.0 5.62e-01 98.1% 64.9%
1xwjA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.73 45.0 4.15e-01 70.5% 49.2%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.73 48.0 5.33e-01 85.7% 83.5%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 59.0 5.90e-01 89.5% 84.1%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.73 49.0 4.76e-01 74.3% 61.9%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 58.0 5.55e-01 87.6% 74.2%
4xvxA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.72 52.0 4.67e-01 80.0% 54.4%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.72 66.0 4.86e-01 100.0% 40.5%
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.71 57.0 5.28e-01 83.8% 68.2%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.71 59.0 6.14e-01 99.0% 100.0%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.71 59.0 6.14e-01 87.6% 99.0%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 56.0 5.70e-01 87.6% 87.3%
7zd5C01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.70 56.0 3.98e-01 85.7% 96.5%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.69 54.0 4.81e-01 85.7% 59.2%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 57.0 3.99e-01 89.5% 40.0%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.66 47.0 4.34e-01 73.3% 69.2%
2oexA02 1.20.140.50 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › alix/aip1 like domains 0.66 59.0 4.85e-01 100.0% 54.3%
3udcA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 47.0 4.55e-01 79.0% 66.1%
2uuiA00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.65 45.0 3.92e-01 75.2% 47.7%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.64 46.0 4.44e-01 86.7% 65.8%
4mrsA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.64 56.0 3.89e-01 95.2% 61.1%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.64 54.0 4.28e-01 95.2% 45.3%
7sgrA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.64 56.0 4.05e-01 99.0% 43.5%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.63 53.0 5.47e-01 95.2% 99.0%
1dxrL02 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.63 50.0 4.97e-01 82.9% 86.1%
2qvaA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.63 46.0 4.34e-01 86.7% 62.8%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.63 45.0 4.46e-01 80.0% 70.5%
4ezbA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.54 37.0 3.59e-01 84.8% 63.2%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2429105 4992.1.1.0 extended segments › RelB-like › RelB-like › RelB-like 0.90 62.0 7.39e-01 76.2% 100.0%
3595990 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.89 80.0 6.47e-01 96.2% 55.4%
4147453 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.88 69.0 6.85e-01 92.4% 78.2%
5048093 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 73.0 7.17e-01 95.2% 82.7%
5025813 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 71.0 7.01e-01 95.2% 80.9%
3964486 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.86 77.0 6.52e-01 93.3% 71.2%
4110549 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.86 70.0 6.90e-01 95.2% 80.9%
4359654 605.2.1.3 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N 0.85 70.0 6.86e-01 95.2% 80.9%
4516988 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.85 79.0 7.00e-01 96.2% 74.3%
4429833 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.84 70.0 6.87e-01 95.2% 81.8%
3571433 3939.1.1.220 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › KIF21A 0.84 78.0 6.57e-01 96.2% 63.1%
5049284 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.84 77.0 7.35e-01 96.2% 90.8%
4555586 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.84 67.0 6.74e-01 91.4% 82.9%
5060491 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.84 74.0 7.03e-01 92.4% 86.7%
3443143 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.84 80.0 6.56e-01 100.0% 73.1%
4424778 605.2.1.3 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N 0.84 68.0 6.72e-01 95.2% 80.9%
4263341 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.84 69.0 6.72e-01 95.2% 79.1%
1276361 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.83 69.0 6.68e-01 95.2% 78.4%
3240682 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.83 69.0 6.77e-01 97.1% 81.8%
4349607 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.83 69.0 6.78e-01 94.3% 81.8%
5037413 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 73.0 6.10e-01 91.4% 69.7%
4259224 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 71.0 6.09e-01 93.3% 60.6%
3968781 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.83 76.0 6.69e-01 96.2% 71.0%
4321938 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.83 76.0 6.36e-01 96.2% 80.0%
4937739 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 79.0 7.13e-01 100.0% 88.9%
3485540 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.83 71.0 5.76e-01 93.3% 53.1%
4175087 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.82 68.0 6.75e-01 95.2% 82.7%
4994917 3834.1.1.25 alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.82 75.0 5.54e-01 96.2% 58.4%
3473984 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.82 77.0 5.57e-01 98.1% 41.6%
3976215 105.2.1.0 alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C 0.82 76.0 6.53e-01 100.0% 66.5%
3620978 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.82 72.0 4.93e-01 96.2% 30.3%
3482907 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.81 64.0 6.25e-01 90.5% 75.7%
5012109 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.81 66.0 5.45e-01 91.4% 51.8%
4120406 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.81 68.0 6.69e-01 92.4% 82.7%
5005097 3710.1.1.0 alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain 0.81 77.0 7.02e-01 100.0% 87.2%
5083949 5086.1.1.84 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.81 74.0 6.79e-01 96.2% 90.8%
3949412 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 73.0 5.89e-01 95.2% 85.9%
3795757 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.80 74.0 5.33e-01 97.1% 81.1%
3385717 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.80 73.0 6.08e-01 96.2% 61.2%
5052205 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.80 73.0 4.37e-01 96.2% 18.3%
5033885 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.80 75.0 5.87e-01 100.0% 90.2%
3461533 3755.3.1.610 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › UPF0114 0.80 65.0 6.16e-01 93.3% 73.6%
3598168 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.79 72.0 6.07e-01 96.2% 82.4%
5039743 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.79 69.0 5.84e-01 97.1% 58.8%
3470751 3755.3.1.297 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 0.79 73.0 6.16e-01 96.2% 63.7%
3166260 1.1.7.123 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25885 0.79 75.0 6.88e-01 100.0% 97.7%
3967813 5086.1.1.93 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_EMRA 0.79 74.0 6.85e-01 100.0% 97.7%
3874984 192.8.1.248 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th 0.79 72.0 4.89e-01 96.2% 46.6%
4076629 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.79 70.0 5.00e-01 100.0% 35.6%
4231809 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.79 63.0 3.95e-01 87.6% 18.3%
5043886 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.78 71.0 5.90e-01 96.2% 82.9%
3927056 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.78 69.0 5.36e-01 93.3% 47.6%
3968997 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.78 70.0 6.50e-01 96.2% 80.0%
3169381 874.1.1.0 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.78 73.0 5.74e-01 100.0% 53.2%
4517020 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.78 73.0 4.75e-01 99.0% 92.0%
5032512 5086.1.1.234 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › CdvA 0.77 67.0 6.13e-01 95.2% 72.6%
3611289 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.77 70.0 6.20e-01 97.1% 76.6%
3740547 5086.1.1.87 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.77 59.0 5.87e-01 84.8% 76.4%
5008718 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.77 69.0 4.41e-01 96.2% 40.0%
3984078 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.77 68.0 4.86e-01 98.1% 34.2%
3563649 148.1.3.254 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KIF21A_4th 0.77 69.0 4.64e-01 96.2% 42.8%
3967398 3755.1.1.1 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO 0.76 69.0 6.05e-01 96.2% 67.3%
3903553 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.76 59.0 5.68e-01 89.5% 73.0%
3616967 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.75 68.0 4.93e-01 94.3% 85.1%
3376917 192.24.1.8 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › CDK5RAP3 0.75 55.0 6.15e-01 82.9% 100.0%
3453972 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.75 68.0 6.17e-01 99.0% 78.6%
4461893 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.74 70.0 4.25e-01 100.0% 31.1%
4395939 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.74 65.0 4.87e-01 96.2% 91.4%
4993051 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.73 69.0 4.24e-01 100.0% 30.4%
3250955 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.73 67.0 4.83e-01 100.0% 70.9%
3608012 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 55.0 5.98e-01 83.8% 98.8%
4025799 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 63.0 5.17e-01 95.2% 74.6%
3869913 2004.1.1.442 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 0.71 64.0 4.12e-01 95.2% 35.6%
3675423 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.71 64.0 5.57e-01 99.0% 76.2%
4516566 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.71 63.0 5.11e-01 96.2% 55.3%
4958230 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.71 65.0 4.43e-01 99.0% 60.0%
5019536 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.69 63.0 4.90e-01 100.0% 61.3%
3584480 3835.1.1.0 alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein 0.68 57.0 4.84e-01 89.5% 59.4%
3925622 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.68 64.0 4.80e-01 100.0% 91.1%
3276221 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.68 58.0 5.41e-01 99.0% 74.6%
4663047 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 50.0 3.89e-01 81.0% 36.4%
4940229 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.63 55.0 3.79e-01 97.1% 40.5%
4927602 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.60 49.0 4.61e-01 100.0% 72.3%