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IMGVR_UViG_3300009614_000103-3300009614-Ga0116104_100003485
Arc-VirIMGVR_UViG_3300009614_000103-3300009614-Ga0116104_100003485
Identity
- Kingdom:
- archaea
Quality
80.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-70
Domain cluster:
rep: OR387546.1__WOZ56478.1__GHCGIGKI_00120__00024__D924-1000
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vm9A02 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.79 | 72.0 | 6.32e-01 | 100.0% | 87.8% |
| 4mtmA01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.74 | 67.0 | 5.98e-01 | 100.0% | 75.0% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 64.0 | 5.64e-01 | 100.0% | 77.5% |
| 3fcsA03 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.66 | 58.0 | 4.64e-01 | 100.0% | 51.8% |
| 4indA03 | 2.60.120.1330 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 57.0 | 4.83e-01 | 100.0% | 85.7% |
| 1wlhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 56.0 | 4.96e-01 | 100.0% | 75.2% |
| 2di7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 55.0 | 4.89e-01 | 100.0% | 80.4% |
| 2zf9A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 55.0 | 4.16e-01 | 100.0% | 42.9% |
| 3v8oA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 55.0 | 5.02e-01 | 100.0% | 74.2% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.64 | 54.0 | 3.91e-01 | 100.0% | 34.1% |
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 55.0 | 5.15e-01 | 100.0% | 94.4% |
| 1dceA02 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.64 | 54.0 | 4.86e-01 | 100.0% | 77.7% |
| 1l3wA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.63 | 54.0 | 4.68e-01 | 100.0% | 74.6% |
| 4nzdB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 54.0 | 4.89e-01 | 100.0% | 76.8% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 53.0 | 4.33e-01 | 100.0% | 89.4% |
| 1x9pA01 | 2.60.120.550 | Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1 | 0.63 | 53.0 | 4.18e-01 | 100.0% | 84.0% |
| 6lbsB01 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.63 | 48.0 | 4.67e-01 | 84.1% | 98.7% |
| 2xdhA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 53.0 | 4.33e-01 | 100.0% | 50.7% |
| 1f0lA03 | 2.60.40.700 | Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain | 0.61 | 52.0 | 4.16e-01 | 100.0% | 56.5% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 49.0 | 4.57e-01 | 100.0% | 70.0% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 52.0 | 4.18e-01 | 100.0% | 57.5% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 52.0 | 4.86e-01 | 100.0% | 77.5% |
| 3efoB03 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.60 | 53.0 | 4.27e-01 | 100.0% | 85.4% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.60 | 49.0 | 4.75e-01 | 100.0% | 79.7% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.60 | 50.0 | 3.53e-01 | 100.0% | 69.0% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 51.0 | 4.28e-01 | 100.0% | 73.8% |
| 3wnkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 50.0 | 4.23e-01 | 98.6% | 68.0% |
| 2oznA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 4.15e-01 | 100.0% | 79.7% |
| 1nlqE00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.59 | 51.0 | 4.60e-01 | 100.0% | 94.9% |
| 2zoeB02 | 2.60.120.1080 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 4.02e-01 | 100.0% | 73.0% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.59 | 51.0 | 3.39e-01 | 100.0% | 59.9% |
| 7zgmA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 49.0 | 3.51e-01 | 100.0% | 66.8% |
| 7y6oA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.72e-01 | 100.0% | 82.0% |
| 2xsgB01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 50.0 | 3.38e-01 | 100.0% | 68.8% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 49.0 | 3.42e-01 | 100.0% | 35.1% |
| 6mfaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.47e-01 | 95.7% | 78.5% |
| 1xe0C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.58 | 50.0 | 4.50e-01 | 100.0% | 93.1% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.58 | 48.0 | 3.93e-01 | 100.0% | 54.3% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.58 | 47.0 | 4.26e-01 | 100.0% | 79.4% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.58 | 48.0 | 3.41e-01 | 100.0% | 65.6% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 48.0 | 4.67e-01 | 100.0% | 94.9% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 48.0 | 4.53e-01 | 98.6% | 80.5% |
| 8egxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.57 | 47.0 | 4.30e-01 | 100.0% | 81.2% |
| 4fomA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.30e-01 | 100.0% | 80.8% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.44e-01 | 100.0% | 87.5% |
| 2w9xB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 46.0 | 4.21e-01 | 100.0% | 96.0% |
| 1kv3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 3.91e-01 | 91.3% | 73.0% |
| 6lynD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.45e-01 | 100.0% | 85.1% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.55 | 46.0 | 4.26e-01 | 100.0% | 96.9% |
| 2wvxA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 44.0 | 3.08e-01 | 100.0% | 54.2% |
| 1vhkA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.54 | 44.0 | 4.34e-01 | 91.3% | 91.8% |
| 1z85A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.54 | 43.0 | 4.38e-01 | 92.8% | 91.0% |
| 1k3xA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.54 | 38.0 | 3.20e-01 | 75.4% | 81.7% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.49e-01 | 100.0% | 63.1% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.53 | 42.0 | 4.05e-01 | 89.9% | 81.7% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.89e-01 | 100.0% | 82.9% |
| 6f91A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 42.0 | 2.98e-01 | 100.0% | 68.7% |
| 2opkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 45.0 | 4.11e-01 | 100.0% | 79.8% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081149 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.85 | 76.0 | 7.64e-01 | 100.0% | 95.7% |
| 3582449 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.78 | 68.0 | 6.67e-01 | 100.0% | 89.2% |
| 4936902 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.77 | 70.0 | 6.69e-01 | 100.0% | 92.5% |
| 3649226 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.77 | 67.0 | 4.07e-01 | 100.0% | 16.1% |
| 3270934 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.77 | 69.0 | 6.00e-01 | 100.0% | 92.4% |
| 3588730 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.77 | 67.0 | 5.94e-01 | 100.0% | 68.4% |
| 2491354 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.76 | 69.0 | 6.12e-01 | 100.0% | 70.8% |
| 4010284 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.76 | 69.0 | 5.97e-01 | 100.0% | 68.3% |
| 4347477 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.69 | 60.0 | 5.80e-01 | 100.0% | 88.7% |
| 4261987 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 61.0 | 5.01e-01 | 100.0% | 59.2% |
| 5035809 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.69 | 60.0 | 5.51e-01 | 100.0% | 75.6% |
| 3513508 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 60.0 | 5.12e-01 | 100.0% | 73.9% |
| 3978478 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.68 | 60.0 | 4.98e-01 | 100.0% | 56.5% |
| 3896244 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 60.0 | 4.95e-01 | 100.0% | 58.4% |
| 2105161 | 11.1.1.280 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ChiW_Ig_like | 0.67 | 58.0 | 4.96e-01 | 100.0% | 76.9% |
| 4950601 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.67 | 57.0 | 5.19e-01 | 97.1% | 83.2% |
| 3259136 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 56.0 | 4.71e-01 | 100.0% | 74.4% |
| 3605691 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.66 | 57.0 | 4.88e-01 | 100.0% | 62.6% |
| 3703868 | 11.1.1.944 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7498 | 0.65 | 56.0 | 4.85e-01 | 100.0% | 72.2% |
| 3909697 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 56.0 | 4.97e-01 | 100.0% | 70.5% |
| 3924186 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 53.0 | 4.72e-01 | 94.2% | 65.7% |
| 2859191 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 55.0 | 4.12e-01 | 100.0% | 46.6% |
| 3604177 | 3386.2.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 | 0.64 | 55.0 | 5.55e-01 | 98.6% | 97.1% |
| 3536330 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 55.0 | 4.28e-01 | 100.0% | 51.6% |
| 5051358 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 55.0 | 4.84e-01 | 100.0% | 65.7% |
| 5005058 | 4081.1.1.12 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 | 0.63 | 53.0 | 3.97e-01 | 100.0% | 35.4% |
| 3937376 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.62 | 53.0 | 4.82e-01 | 100.0% | 73.0% |
| 5039741 | 11.1.1.288 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_13 | 0.62 | 53.0 | 4.78e-01 | 100.0% | 74.0% |
| 4939191 | 10.1.1.64 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF2341 | 0.61 | 52.0 | 3.54e-01 | 100.0% | 27.6% |
| 3859747 | 11.1.1.308 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ICAM1_3_5_D2 | 0.61 | 52.0 | 4.78e-01 | 100.0% | 80.0% |
| 3255936 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.58e-01 | 100.0% | 83.8% |
| 5002657 | 12.1.1.114 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 | 0.61 | 52.0 | 4.92e-01 | 100.0% | 90.6% |
| 3395348 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.60 | 51.0 | 4.56e-01 | 100.0% | 78.1% |
| 4215475 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.60 | 49.0 | 2.89e-01 | 100.0% | 26.6% |
| 5080991 | 11.1.1.351 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD | 0.60 | 51.0 | 4.69e-01 | 100.0% | 76.8% |
| 3883234 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 50.0 | 4.61e-01 | 100.0% | 84.2% |
| 3274779 | 11.1.1.701 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_SIBA-E_3rd | 0.60 | 50.0 | 3.90e-01 | 100.0% | 49.4% |
| 4125814 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.59 | 50.0 | 4.89e-01 | 100.0% | 89.3% |
| 3590148 | 11.1.5.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GBS104-like_Ig | 0.59 | 50.0 | 3.72e-01 | 100.0% | 35.5% |
| 4387316 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.59 | 49.0 | 3.46e-01 | 100.0% | 71.2% |
| 1714465 | 10.26.1.1 ↗ | beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › Pox_C7_F8A | 0.59 | 50.0 | 3.98e-01 | 97.1% | 51.0% |
| 5037360 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.59 | 52.0 | 4.41e-01 | 100.0% | 60.9% |
| 3395351 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.59 | 49.0 | 4.37e-01 | 100.0% | 76.4% |
| 3267585 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.66e-01 | 89.9% | 87.1% |
| 3263255 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 50.0 | 4.36e-01 | 100.0% | 80.9% |
| 3267385 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.58 | 50.0 | 4.01e-01 | 100.0% | 55.2% |
| 3264084 | 11.1.1.701 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_SIBA-E_3rd | 0.58 | 49.0 | 4.14e-01 | 100.0% | 69.6% |
| 4367883 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.57 | 46.0 | 4.22e-01 | 91.3% | 80.0% |
| 1296266 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.57 | 47.0 | 3.39e-01 | 100.0% | 66.1% |
| 3934458 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 44.0 | 4.13e-01 | 91.3% | 72.6% |
| 3575359 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.57 | 49.0 | 4.26e-01 | 100.0% | 66.4% |
| 3861624 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.56 | 47.0 | 4.03e-01 | 100.0% | 84.8% |
| 3897394 | 11.1.5.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sec23_BS | 0.56 | 49.0 | 3.67e-01 | 100.0% | 57.8% |
| 3558878 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 48.0 | 4.45e-01 | 100.0% | 77.8% |
| 3480731 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.04e-01 | 100.0% | 66.7% |
| 4287778 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.56 | 45.0 | 4.18e-01 | 91.3% | 83.3% |
| 4282712 | 11.1.1.1026 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28430 | 0.56 | 46.0 | 4.01e-01 | 97.1% | 66.1% |
| 3940452 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 46.0 | 3.91e-01 | 100.0% | 63.8% |
| 3768909 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.55 | 46.0 | 4.20e-01 | 100.0% | 77.0% |
| 4248195 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.55 | 43.0 | 3.99e-01 | 89.9% | 78.9% |
| 4668791 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.55 | 44.0 | 3.94e-01 | 92.8% | 78.1% |
| 3591504 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 4.18e-01 | 100.0% | 76.8% |
| 3883286 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 45.0 | 3.88e-01 | 100.0% | 61.6% |
| 4270212 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.54 | 43.0 | 4.06e-01 | 91.3% | 83.1% |
| 3591505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.06e-01 | 100.0% | 71.1% |
| 3488032 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.24e-01 | 100.0% | 95.6% |
| 3602123 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.54 | 41.0 | 4.05e-01 | 88.4% | 94.9% |
| 4486481 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 43.0 | 3.97e-01 | 100.0% | 76.0% |
| 3961820 | 10.20.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N | 0.52 | 43.0 | 3.86e-01 | 100.0% | 68.2% |
| 3955793 | 10.20.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N | 0.52 | 43.0 | 3.60e-01 | 100.0% | 55.6% |
| 3277295 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.92e-01 | 100.0% | 79.0% |
D2
medium
residues 91-207
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jkxA00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.57 | 44.0 | 3.66e-01 | 82.1% | 93.8% |
| 4ib4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 40.0 | 3.02e-01 | 72.6% | 46.7% |
| 3emlA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 39.0 | 2.93e-01 | 74.4% | 45.5% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 37.0 | 2.84e-01 | 74.4% | 48.0% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 36.0 | 2.61e-01 | 70.9% | 37.0% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.51 | 39.0 | 3.61e-01 | 78.6% | 74.5% |
| 3fkjA02 | 1.10.10.2240 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 24.0 | 3.15e-01 | 77.8% | 81.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031309 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.72 | 47.0 | 5.32e-01 | 99.1% | 86.7% |
| 3280252 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.54 | 45.0 | 3.24e-01 | 92.3% | 66.2% |
| 3518967 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 38.0 | 2.76e-01 | 74.4% | 44.1% |
| None | — | 0.52 | 37.0 | 2.77e-01 | 74.4% | 39.4% | |
| 3242420 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 38.0 | 2.80e-01 | 77.8% | 30.3% |
| 5036646 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.51 | 33.0 | 3.71e-01 | 79.5% | 85.6% |