Back to structures

IMGVR_UViG_3300009617_000136-3300009617-Ga0116123_10052177

Arc-Vir

IMGVR_UViG_3300009617_000136-3300009617-Ga0116123_10052177

Quality

71.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 97-183
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.73 65.0 4.64e-01 100.0% 34.7%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.71 63.0 5.34e-01 100.0% 60.4%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.70 45.0 4.48e-01 70.1% 62.6%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 57.0 3.89e-01 89.7% 74.6%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.68 63.0 5.18e-01 100.0% 70.7%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.68 60.0 4.10e-01 100.0% 28.4%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.67 56.0 3.85e-01 89.7% 76.4%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.67 61.0 4.84e-01 100.0% 67.2%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.66 60.0 3.72e-01 100.0% 76.7%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.66 60.0 3.71e-01 100.0% 75.6%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.66 60.0 4.59e-01 100.0% 46.2%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 47.0 4.04e-01 94.3% 48.9%
3khpD01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 51.0 4.36e-01 82.8% 94.1%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 55.0 3.56e-01 89.7% 64.9%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.64 55.0 4.30e-01 96.6% 71.5%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.62 55.0 3.85e-01 100.0% 54.7%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.62 54.0 4.85e-01 97.7% 94.3%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.62 44.0 3.17e-01 75.9% 26.4%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.61 55.0 3.82e-01 100.0% 95.9%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 55.0 4.65e-01 100.0% 64.1%
3kg8A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 50.0 4.39e-01 89.7% 93.8%
7knlA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 52.0 4.80e-01 96.6% 78.9%
5kbzB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.60 55.0 3.68e-01 100.0% 43.8%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.60 50.0 3.89e-01 94.3% 84.2%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.59 51.0 3.72e-01 100.0% 40.1%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.58 53.0 4.40e-01 100.0% 71.8%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.58 45.0 3.70e-01 98.9% 45.4%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.68e-01 89.7% 97.4%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.55 48.0 3.12e-01 100.0% 68.6%
1t5rB00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.55 47.0 3.40e-01 96.6% 80.8%
4pn0C00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.55 45.0 3.25e-01 89.7% 62.5%
5fubA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.54 46.0 3.75e-01 100.0% 98.4%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.54 47.0 3.35e-01 100.0% 47.5%
4c08A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.54 46.0 3.74e-01 100.0% 99.5%
6hpvA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 4.43e-01 87.4% 100.0%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 36.0 3.25e-01 100.0% 48.1%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.50 43.0 3.74e-01 97.7% 63.3%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5035736 71.1.1.26 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF3108 0.89 78.0 6.06e-01 100.0% 47.1%
4958640 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.82 71.0 5.57e-01 100.0% 46.6%
1569478 527.1.1.1 beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Orthopox_35kD 0.75 51.0 4.14e-01 70.1% 66.7%
3968293 71.2.1.3 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › DUF3108 0.72 60.0 4.47e-01 100.0% 37.1%
3388794 71.2.1.0 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like 0.72 65.0 4.70e-01 100.0% 41.7%
4345467 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.70 54.0 3.30e-01 79.3% 25.4%
5019252 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.70 54.0 3.24e-01 79.3% 22.7%
4181051 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.70 65.0 3.99e-01 100.0% 34.3%
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.70 60.0 4.54e-01 100.0% 40.9%
3892200 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.69 61.0 4.46e-01 100.0% 36.2%
5059286 4200.1.1.0 beta barrels › YmcC-like › YmcC-like › YmcC-like 0.69 62.0 4.62e-01 100.0% 49.1%
3074009 9.1.1.31 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VtrC 0.69 62.0 5.37e-01 100.0% 70.7%
3366063 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.68 62.0 4.86e-01 100.0% 59.4%
3243473 5087.1.1.0 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 0.68 63.0 4.45e-01 100.0% 51.6%
4025179 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.68 61.0 4.55e-01 96.6% 52.7%
5052250 12.3.1.15 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C 0.68 58.0 3.93e-01 89.7% 63.3%
3243813 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.67 48.0 4.27e-01 74.7% 66.7%
4997634 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 48.0 3.89e-01 74.7% 61.9%
3875809 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.66 62.0 4.90e-01 100.0% 59.4%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.66 59.0 5.42e-01 100.0% 76.4%
3707067 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 60.0 4.37e-01 100.0% 48.4%
3576360 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.65 59.0 4.65e-01 100.0% 56.0%
3734385 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.65 53.0 3.40e-01 88.5% 74.0%
3462119 9.1.1.23 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.65 56.0 4.30e-01 93.1% 50.3%
3056279 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.65 60.0 4.78e-01 100.0% 62.6%
3501611 7026.1.1.0 beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.64 55.0 4.07e-01 94.3% 52.2%
3628180 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.63 44.0 3.58e-01 71.3% 64.5%
5047323 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.63 55.0 3.96e-01 97.7% 89.4%
4403206 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.62 57.0 4.66e-01 100.0% 60.6%
4948119 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.61 56.0 5.03e-01 100.0% 92.5%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.61 45.0 4.71e-01 79.3% 83.7%
3624756 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.61 54.0 5.10e-01 97.7% 97.1%
2773699 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.60 51.0 4.63e-01 98.9% 92.9%
3924297 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.60 53.0 5.10e-01 96.6% 100.0%
3633013 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.59 52.0 4.44e-01 98.9% 74.5%
4022346 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.59 51.0 3.55e-01 100.0% 92.2%
3769924 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.58 50.0 4.45e-01 98.9% 80.8%
4977538 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.58 47.0 4.41e-01 100.0% 71.3%
4980165 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 52.0 3.26e-01 97.7% 26.4%
3420607 708.1.1.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.57 44.0 4.14e-01 85.1% 86.4%
3836869 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.57 49.0 4.44e-01 97.7% 89.2%
3349375 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 50.0 4.31e-01 96.6% 77.8%
1502527 5089.1.1.4 beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF_1 0.55 44.0 3.08e-01 88.5% 92.6%
3408261 243.3.1.35 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 0.54 44.0 3.87e-01 93.1% 80.6%
5064686 4178.1.1.1 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.52 47.0 4.09e-01 98.9% 95.3%
D2 high residues 198-266
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.76 69.0 4.92e-01 100.0% 49.2%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.72 65.0 4.73e-01 100.0% 89.6%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.71 61.0 4.17e-01 95.7% 34.3%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.69 60.0 4.92e-01 95.7% 93.5%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.69 60.0 4.82e-01 100.0% 50.7%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.68 49.0 5.21e-01 75.4% 93.2%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 52.0 5.04e-01 82.6% 92.1%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.66 57.0 4.40e-01 94.2% 51.0%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 50.0 4.55e-01 81.2% 61.5%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.65 55.0 4.49e-01 95.7% 76.9%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.65 45.0 4.11e-01 71.0% 58.4%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 47.0 4.04e-01 78.3% 83.5%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.64 51.0 4.04e-01 94.2% 40.5%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.64 52.0 4.08e-01 89.9% 47.3%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.64 55.0 4.47e-01 95.7% 85.2%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 54.0 3.40e-01 91.3% 34.6%
1uv4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 55.0 3.66e-01 100.0% 39.2%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.63 42.0 4.44e-01 73.9% 80.0%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.62 53.0 4.66e-01 98.6% 64.3%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 48.0 2.96e-01 84.1% 90.8%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.62 55.0 4.32e-01 97.1% 63.3%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.62 52.0 3.57e-01 98.6% 36.1%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 55.0 4.28e-01 98.6% 52.1%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.61 51.0 3.97e-01 100.0% 66.7%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.60 46.0 3.21e-01 82.6% 45.3%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 43.0 4.50e-01 75.4% 84.1%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.60 50.0 4.41e-01 92.8% 98.0%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.59 41.0 3.95e-01 79.7% 61.9%
5cfvA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.59 49.0 4.26e-01 95.7% 59.8%
1f2uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 50.0 3.81e-01 91.3% 73.8%
3ijlA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 42.0 3.71e-01 78.3% 95.4%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 4.05e-01 89.9% 79.1%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.57 47.0 3.71e-01 95.7% 54.9%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 4.50e-01 98.6% 96.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.22e-01 87.0% 79.7%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.57 51.0 4.50e-01 97.1% 100.0%
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.57 48.0 3.61e-01 95.7% 71.7%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 48.0 3.66e-01 98.6% 49.4%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.57 49.0 3.45e-01 97.1% 62.9%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.56 50.0 2.87e-01 98.6% 65.6%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 45.0 3.22e-01 94.2% 36.0%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.54 41.0 3.56e-01 81.2% 83.0%
2e5aA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.53 44.0 4.07e-01 100.0% 72.0%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 41.0 3.63e-01 88.4% 58.7%
2g30A01 2.60.40.1150 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.76e-01 98.6% 58.1%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 42.0 3.40e-01 94.2% 53.5%
6i8wB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 42.0 2.80e-01 94.2% 88.6%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 40.0 3.29e-01 89.9% 44.1%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 44.0 3.02e-01 100.0% 58.6%
3cwvA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 43.0 3.37e-01 94.2% 97.4%
4i14A02 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.50 42.0 3.55e-01 98.6% 63.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032631 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.82 76.0 5.08e-01 100.0% 46.1%
5035736 71.1.1.26 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF3108 0.80 75.0 5.45e-01 100.0% 98.8%
3907198 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.78 72.0 5.01e-01 100.0% 82.0%
3391001 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.78 72.0 4.89e-01 100.0% 80.0%
3939687 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.73 59.0 5.17e-01 87.0% 79.0%
1395707 5084.5.1.16 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BVU_2266-like 0.71 61.0 4.17e-01 95.7% 34.3%
3589805 243.8.1.0 a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein 0.70 59.0 5.33e-01 92.8% 75.8%
3208760 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.70 50.0 4.46e-01 73.9% 58.9%
4655950 274.1.1.4 a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.69 50.0 4.24e-01 81.2% 46.1%
4024769 9.11.1.0 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.69 54.0 5.55e-01 91.3% 87.7%
3984883 274.1.1.4 a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.69 50.0 4.16e-01 79.7% 45.2%
3769924 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.69 59.0 4.75e-01 94.2% 80.0%
3261183 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.68 61.0 4.53e-01 100.0% 88.0%
3624756 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.67 58.0 5.05e-01 95.7% 97.1%
5079259 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.67 55.0 3.49e-01 88.4% 33.8%
2773699 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.67 57.0 4.66e-01 94.2% 90.5%
3936392 101.1.12.3 alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.66 56.0 4.30e-01 92.8% 98.7%
3836869 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.66 56.0 4.63e-01 92.8% 87.5%
3967479 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.66 56.0 4.18e-01 95.7% 46.1%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.65 56.0 4.26e-01 100.0% 90.3%
1405147 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.65 57.0 4.64e-01 97.1% 93.7%
4345467 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 56.0 3.35e-01 92.8% 23.0%
5019252 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.65 56.0 3.30e-01 92.8% 20.6%
3742459 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.65 56.0 4.93e-01 95.7% 100.0%
3794870 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.65 57.0 4.38e-01 100.0% 68.8%
3897847 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.64 57.0 4.30e-01 100.0% 64.5%
3230598 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.64 57.0 4.44e-01 100.0% 68.0%
5043802 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 47.0 4.05e-01 92.8% 47.8%
3406725 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.64 55.0 3.74e-01 98.6% 35.6%
3885687 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.64 54.0 3.70e-01 98.6% 35.2%
3279504 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 56.0 4.23e-01 98.6% 47.3%
3676609 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 49.0 3.20e-01 84.1% 24.9%
1176515 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.63 54.0 3.90e-01 91.3% 62.1%
4960428 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 44.0 3.03e-01 75.4% 21.6%
4977257 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.62 50.0 3.35e-01 100.0% 23.6%
5073876 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.62 52.0 3.12e-01 91.3% 22.1%
5029795 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.62 52.0 3.24e-01 91.3% 28.6%
3318685 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.62 53.0 4.61e-01 95.7% 61.9%
4947567 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 52.0 3.10e-01 91.3% 22.4%
3282315 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 50.0 3.84e-01 92.8% 46.5%
4028363 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 51.0 4.72e-01 92.8% 93.3%
4954368 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.61 51.0 4.04e-01 92.8% 45.0%
3175088 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.60 52.0 4.00e-01 98.6% 49.7%
4466226 5087.1.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.60 53.0 4.55e-01 95.7% 67.6%
3468807 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.60 49.0 3.14e-01 91.3% 43.9%
5077103 5.1.11.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › PQQ_2 0.59 52.0 3.16e-01 98.6% 22.2%
4963648 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.59 50.0 2.99e-01 91.3% 21.6%
4139499 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.59 50.0 2.95e-01 91.3% 19.7%
4978713 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.59 50.0 3.36e-01 95.7% 96.8%
5047928 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.58 51.0 4.28e-01 98.6% 81.7%
5047426 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.57 51.0 4.31e-01 100.0% 82.6%
5047424 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.57 50.0 4.17e-01 98.6% 80.8%
3679340 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.57 48.0 4.11e-01 94.2% 64.5%
3798317 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 47.0 3.55e-01 100.0% 82.5%
4825040 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.56 46.0 3.63e-01 89.9% 78.9%
3970330 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.56 46.0 3.73e-01 91.3% 88.9%
5057921 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.56 48.0 3.32e-01 100.0% 27.4%
3316054 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 2.85e-01 94.2% 97.6%
4977909 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.55 43.0 3.78e-01 92.8% 55.5%
5083710 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.54 46.0 3.03e-01 91.3% 41.9%
3593021 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 3.76e-01 98.6% 53.3%
3251351 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.53 42.0 3.68e-01 95.7% 97.5%
4984586 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.53 42.0 3.65e-01 88.4% 58.2%
3832276 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.51 41.0 3.55e-01 92.8% 89.6%