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IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074331
Arc-VirIMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074331
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-106
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 36.0 | 3.76e-01 | 91.0% | 65.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.55 | 38.0 | 3.32e-01 | 73.1% | 63.6% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 38.0 | 3.81e-01 | 95.5% | 72.1% |
| 2px0A01 | 1.20.120.1380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain | 0.54 | 43.0 | 4.21e-01 | 92.5% | 80.8% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.54 | 37.0 | 3.44e-01 | 100.0% | 55.1% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.53 | 44.0 | 3.62e-01 | 97.0% | 84.0% |
| 4y5jA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 41.0 | 2.98e-01 | 95.5% | 36.6% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.51 | 37.0 | 3.62e-01 | 92.5% | 69.2% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.51 | 40.0 | 3.50e-01 | 98.5% | 74.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3888349 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.57 | 47.0 | 3.91e-01 | 95.5% | 91.5% |
| 3967002 | 3843.1.1.27 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › COX4_pro | 0.56 | 43.0 | 4.02e-01 | 83.6% | 80.0% |
| 3554229 | 109.4.1.598 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mak10 | 0.54 | 41.0 | 2.68e-01 | 82.1% | 47.5% |
| 5050536 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 38.0 | 3.80e-01 | 89.6% | 72.9% |
| 3806548 | 109.4.1.1718 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26716 | 0.52 | 42.0 | 3.72e-01 | 94.0% | 78.1% |
| 3832554 | 3588.1.1.2 ↗ | alpha complex topology › RNAi polymerase helical domain › RNAi polymerase helical domain › RNAi polymerase helical domain › RdRP, PF26253 | 0.51 | 39.0 | 2.52e-01 | 86.6% | 32.9% |
| 3934049 | 109.4.1.155 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med23 | 0.50 | 44.0 | 2.99e-01 | 97.0% | 38.8% |
| 3788338 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.50 | 38.0 | 3.71e-01 | 94.0% | 74.3% |