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IMGVR_UViG_3300009618_000238-3300009618-Ga0116127_10054502
Arc-VirIMGVR_UViG_3300009618_000238-3300009618-Ga0116127_10054502
Identity
- Kingdom:
- archaea
Quality
66.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 103-175
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 58.0 | 4.16e-01 | 100.0% | 96.6% |
| 4do8A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 34.0 | 3.54e-01 | 100.0% | 62.1% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.57 | 42.0 | 3.90e-01 | 95.9% | 62.0% |
| 2hfqA00 | 3.10.510.10 | Alpha Beta › Roll › NE1680-like fold › NE1680-like | 0.56 | 36.0 | 3.49e-01 | 100.0% | 56.5% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.54 | 41.0 | 3.08e-01 | 100.0% | 31.2% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.54 | 38.0 | 3.34e-01 | 89.0% | 47.4% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.10e-01 | 100.0% | 84.7% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.53 | 44.0 | 4.06e-01 | 97.3% | 69.5% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.53 | 39.0 | 3.50e-01 | 98.6% | 56.3% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.14e-01 | 100.0% | 40.0% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 39.0 | 3.50e-01 | 98.6% | 57.7% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 38.0 | 3.41e-01 | 98.6% | 56.7% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 39.0 | 2.91e-01 | 100.0% | 32.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010689 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.65 | 40.0 | 2.92e-01 | 100.0% | 22.5% |
| 3389698 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.58 | 49.0 | 3.31e-01 | 98.6% | 54.4% |
| 3704395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.30e-01 | 97.3% | 87.5% |
| 4342567 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 47.0 | 3.99e-01 | 89.0% | 80.0% |
| 3713334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 38.0 | 4.16e-01 | 94.5% | 90.0% |
| 3708505 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 48.0 | 3.91e-01 | 100.0% | 61.5% |
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 38.0 | 3.75e-01 | 97.3% | 70.0% |
| 3805299 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.52 | 47.0 | 3.11e-01 | 100.0% | 100.0% |
| 3449628 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.52 | 37.0 | 3.22e-01 | 98.6% | 47.8% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.52 | 41.0 | 4.12e-01 | 100.0% | 86.5% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.52 | 40.0 | 4.14e-01 | 97.3% | 88.6% |
| 3940233 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.67e-01 | 100.0% | 60.9% |
| 3447254 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.51 | 39.0 | 2.83e-01 | 84.9% | 79.5% |
| 3924619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 40.0 | 3.49e-01 | 100.0% | 55.0% |
| 3181799 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 39.0 | 3.04e-01 | 86.3% | 62.9% |