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IMGVR_UViG_3300009618_000262-3300009618-Ga0116127_100296610
Arc-VirIMGVR_UViG_3300009618_000262-3300009618-Ga0116127_100296610
Identity
- Kingdom:
- archaea
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-114
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.70 | 61.0 | 5.28e-01 | 97.1% | 92.4% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.66 | 58.0 | 5.01e-01 | 98.6% | 91.7% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.65 | 57.0 | 5.22e-01 | 100.0% | 80.9% |
| 2i8dA01 | 3.90.1150.200 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.65 | 53.0 | 5.05e-01 | 88.4% | 77.8% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.65 | 54.0 | 4.42e-01 | 92.8% | 88.5% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.61 | 50.0 | 4.43e-01 | 94.2% | 91.7% |
| 4pphA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.60 | 43.0 | 3.18e-01 | 78.3% | 60.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 46.0 | 4.23e-01 | 88.4% | 86.8% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.57 | 42.0 | 4.19e-01 | 78.3% | 80.0% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 43.0 | 3.30e-01 | 84.1% | 67.6% |
| 2hesX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 42.0 | 2.77e-01 | 79.7% | 21.1% |
| 4z32C02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 45.0 | 4.02e-01 | 88.4% | 82.8% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 38.0 | 3.54e-01 | 73.9% | 93.5% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 47.0 | 3.70e-01 | 98.6% | 92.9% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.55 | 39.0 | 3.19e-01 | 78.3% | 75.3% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 44.0 | 3.94e-01 | 91.3% | 72.7% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 41.0 | 4.06e-01 | 85.5% | 86.7% |
| 3a46A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.53 | 44.0 | 3.63e-01 | 97.1% | 74.3% |
| 2ftxA00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.53 | 38.0 | 3.59e-01 | 79.7% | 79.8% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.51 | 42.0 | 3.67e-01 | 94.2% | 71.4% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.50 | 38.0 | 3.68e-01 | 82.6% | 94.8% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.50 | 39.0 | 3.52e-01 | 89.9% | 74.0% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.50 | 40.0 | 3.64e-01 | 91.3% | 78.6% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975323 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.74 | 66.0 | 6.09e-01 | 100.0% | 76.7% |
| 5031724 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.74 | 67.0 | 6.07e-01 | 98.6% | 92.2% |
| 5043206 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.71 | 61.0 | 5.87e-01 | 95.7% | 87.5% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.70 | 61.0 | 5.83e-01 | 98.6% | 93.8% |
| 3479080 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.70 | 60.0 | 5.59e-01 | 98.6% | 95.5% |
| 223484 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.70 | 61.0 | 5.28e-01 | 97.1% | 92.4% |
| 4946710 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.69 | 58.0 | 5.69e-01 | 95.7% | 96.0% |
| 4998266 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.68 | 57.0 | 5.74e-01 | 100.0% | 92.9% |
| 4929578 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.68 | 60.0 | 5.01e-01 | 100.0% | 72.5% |
| 3422937 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.68 | 50.0 | 5.25e-01 | 81.2% | 96.7% |
| 3733997 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.67 | 58.0 | 4.80e-01 | 97.1% | 93.6% |
| 4963506 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.67 | 53.0 | 4.18e-01 | 87.0% | 78.6% |
| 5051487 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.67 | 51.0 | 4.19e-01 | 85.5% | 80.7% |
| 4883715 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.66 | 57.0 | 5.11e-01 | 98.6% | 82.0% |
| 5069636 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.66 | 57.0 | 5.28e-01 | 98.6% | 92.2% |
| 1141888 | 331.10.2.2 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › SpmSyn_N | 0.66 | 57.0 | 5.20e-01 | 100.0% | 78.1% |
| 3566394 | 4099.1.1.8 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF4581 | 0.66 | 53.0 | 4.73e-01 | 89.9% | 90.0% |
| 3587052 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.65 | 54.0 | 4.94e-01 | 95.7% | 80.0% |
| 3315025 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.65 | 54.0 | 5.21e-01 | 95.7% | 92.5% |
| 4928709 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.64 | 49.0 | 3.80e-01 | 85.5% | 68.5% |
| 3669346 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.64 | 56.0 | 5.37e-01 | 100.0% | 96.2% |
| 3924724 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.64 | 56.0 | 5.34e-01 | 100.0% | 96.2% |
| 4601033 | 211.1.1.12 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Pfk_N | 0.63 | 54.0 | 4.05e-01 | 95.7% | 86.3% |
| 3253856 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.63 | 51.0 | 4.28e-01 | 91.3% | 73.6% |
| 3763927 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.62 | 54.0 | 4.72e-01 | 100.0% | 73.4% |
| 5083058 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.62 | 45.0 | 4.32e-01 | 78.3% | 95.0% |
| 4863586 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.61 | 53.0 | 5.08e-01 | 100.0% | 85.4% |
| 3700578 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.61 | 45.0 | 4.71e-01 | 81.2% | 100.0% |
| 3677438 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 51.0 | 3.85e-01 | 95.7% | 44.0% |
| 3602725 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.60 | 44.0 | 4.41e-01 | 79.7% | 95.7% |
| 3773898 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.60 | 38.0 | 3.49e-01 | 82.6% | 47.4% |
| 2142345 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.59 | 50.0 | 4.55e-01 | 94.2% | 89.2% |
| 4958977 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.59 | 49.0 | 4.51e-01 | 92.8% | 73.3% |
| 3545742 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 40.0 | 2.47e-01 | 72.5% | 18.5% |
| 3988706 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.58 | 40.0 | 4.07e-01 | 72.5% | 82.9% |
| 4285345 | 4099.1.1.20 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 | 0.58 | 49.0 | 4.13e-01 | 95.7% | 77.5% |
| 4335815 | 292.2.1.14 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › SWIM | 0.58 | 43.0 | 4.21e-01 | 81.2% | 80.0% |
| 2773872 | 5.1.5.79 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, WDR90_beta-prop_4th | 0.58 | 42.0 | 2.71e-01 | 78.3% | 16.8% |
| 3626154 | 4099.1.1.1 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD | 0.57 | 42.0 | 3.54e-01 | 79.7% | 56.8% |
| 4018087 | 4099.1.1.31 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF26204 | 0.56 | 44.0 | 4.03e-01 | 88.4% | 89.5% |
| 3876881 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 41.0 | 2.56e-01 | 82.6% | 94.7% |
| 3587839 | 331.1.1.7 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Rol_Rep_N | 0.55 | 48.0 | 4.39e-01 | 100.0% | 80.0% |
| 5022814 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.55 | 44.0 | 4.36e-01 | 92.8% | 92.0% |
| 4948218 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.55 | 43.0 | 4.16e-01 | 94.2% | 87.1% |
| 3530957 | 5.1.4.329 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 | 0.55 | 39.0 | 2.50e-01 | 79.7% | 13.6% |
| 3972580 | 331.1.1.3 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N | 0.52 | 43.0 | 4.12e-01 | 95.7% | 96.2% |
| 3831584 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.51 | 43.0 | 3.49e-01 | 97.1% | 82.1% |
| None | — | 0.51 | 40.0 | 2.30e-01 | 89.9% | 15.4% |