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IMGVR_UViG_3300009618_000262-3300009618-Ga0116127_100296611
Arc-VirIMGVR_UViG_3300009618_000262-3300009618-Ga0116127_100296611
Identity
- Kingdom:
- archaea
Quality
69.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-70
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ccjA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.56 | 42.0 | 2.92e-01 | 83.3% | 69.5% |
| 1zr6A02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 37.0 | 3.01e-01 | 71.2% | 68.1% |
| 3hsuA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 36.0 | 2.58e-01 | 72.7% | 39.9% |
| 2bvfA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 35.0 | 2.91e-01 | 71.2% | 67.4% |
| 2muoA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.52 | 36.0 | 3.35e-01 | 71.2% | 70.7% |
| 2j4xA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 40.0 | 3.35e-01 | 87.9% | 91.9% |
| 2nn6B01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.51 | 43.0 | 3.03e-01 | 93.9% | 63.5% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.50 | 38.0 | 3.60e-01 | 84.8% | 82.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400984 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 35.0 | 3.80e-01 | 71.2% | 54.5% |
| 148141 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.68 | 47.0 | 4.53e-01 | 71.2% | 64.9% |
| 4969259 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.64 | 53.0 | 3.52e-01 | 95.5% | 50.3% |
| 3977489 | 377.1.1.117 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF27493 | 0.63 | 45.0 | 4.97e-01 | 93.9% | 100.0% |
| 4000496 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.58 | 44.0 | 3.16e-01 | 83.3% | 34.5% |
| 3915274 | 11.1.6.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › FIIND | 0.55 | 42.0 | 3.31e-01 | 80.3% | 79.3% |
| 3848076 | 11.1.6.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › FIIND | 0.55 | 42.0 | 3.29e-01 | 81.8% | 77.9% |
| 2063085 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.54 | 41.0 | 3.21e-01 | 81.8% | 67.4% |
| 3639456 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 48.0 | 2.72e-01 | 100.0% | 9.7% |
| 4345801 | 329.1.1.1 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD | 0.51 | 45.0 | 3.69e-01 | 100.0% | 86.4% |
| 3263142 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.50 | 38.0 | 2.44e-01 | 83.3% | 93.2% |