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IMGVR_UViG_3300009621_000102-3300009621-Ga0116116_10046192

Arc-Vir

IMGVR_UViG_3300009621_000102-3300009621-Ga0116116_10046192

Quality

81.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 62-130
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2j3tD01 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 52.0 4.22e-01 81.2% 100.0%
3cueC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 51.0 4.06e-01 79.7% 58.7%
1w63Q00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.65 48.0 3.78e-01 78.3% 52.0%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.65 52.0 4.44e-01 89.9% 77.3%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 53.0 4.70e-01 88.4% 62.9%
4nhxA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.64 46.0 3.29e-01 76.8% 71.6%
2xa7M01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 48.0 4.02e-01 79.7% 61.7%
2j3tC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 46.0 3.76e-01 78.3% 64.5%
3btxA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.64 47.0 3.41e-01 79.7% 84.8%
4adiA01 2.60.98.30 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Rubella membrane glycoprotein E1, domain 1 0.62 44.0 4.30e-01 76.8% 100.0%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 48.0 4.18e-01 91.3% 83.2%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.61 42.0 3.20e-01 71.0% 92.3%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 48.0 4.15e-01 88.4% 84.6%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.61 45.0 3.74e-01 79.7% 63.3%
1zhhB01 3.30.450.220 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › LuxQ periplasmic domain, N-terminal subdomain 0.61 49.0 3.85e-01 91.3% 67.5%
5cenA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 46.0 4.49e-01 89.9% 75.6%
2xdoD00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 47.0 3.01e-01 88.4% 86.0%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 4.47e-01 91.3% 82.8%
6bfnA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 4.35e-01 89.9% 71.0%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 38.0 3.70e-01 76.8% 58.2%
6k3lB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 4.34e-01 89.9% 76.9%
5gz8A00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 47.0 3.26e-01 92.8% 45.6%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 47.0 3.40e-01 97.1% 30.6%
6baoA03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.57 45.0 3.65e-01 91.3% 72.2%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.56 40.0 3.48e-01 73.9% 61.2%
3csvA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 43.0 4.15e-01 85.5% 73.2%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.76e-01 84.1% 87.5%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 44.0 4.11e-01 91.3% 78.5%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 44.0 4.05e-01 89.9% 68.8%
7l15A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.89e-01 92.8% 68.1%
6mjjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.79e-01 91.3% 66.7%
7zscA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.54 47.0 3.33e-01 100.0% 64.3%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.39e-01 81.2% 77.0%
1x7vA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.45e-01 76.8% 90.8%
5wkfD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.78e-01 91.3% 70.4%
2esvD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.82e-01 91.3% 68.8%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.76e-01 91.3% 69.4%
5eliA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.66e-01 89.9% 71.4%
2bbeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 38.0 3.37e-01 76.8% 53.4%
2eo5A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 39.0 3.12e-01 100.0% 39.2%
4bc3A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 38.0 2.79e-01 82.6% 61.1%
5ex2A01 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.51 41.0 2.95e-01 95.7% 58.9%
2y3mB01 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 34.0 3.31e-01 73.9% 62.3%
4hl9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 38.0 3.46e-01 81.2% 96.8%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 39.0 3.21e-01 100.0% 43.7%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050909 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.73 53.0 4.33e-01 78.3% 61.5%
4999664 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.72 53.0 4.33e-01 78.3% 62.4%
5073031 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 52.0 4.12e-01 78.3% 55.9%
3927983 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 51.0 4.56e-01 78.3% 90.0%
4023939 223.2.1.8 a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.70 51.0 4.04e-01 78.3% 68.3%
3737473 223.2.1.8 a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.70 51.0 3.98e-01 78.3% 64.5%
4998762 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.69 51.0 4.13e-01 78.3% 61.5%
4888580 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.69 51.0 3.92e-01 79.7% 67.3%
5047502 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.69 53.0 4.16e-01 81.2% 55.0%
2755908 223.2.1.8 a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.69 51.0 4.02e-01 79.7% 99.3%
5051230 223.2.1.20 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 0.69 54.0 4.43e-01 85.5% 63.2%
5049789 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.68 53.0 4.40e-01 85.5% 64.0%
5052919 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.68 53.0 4.17e-01 85.5% 56.7%
3432113 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.68 50.0 4.12e-01 78.3% 63.2%
5045233 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.68 49.0 4.08e-01 78.3% 61.6%
4021454 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.67 50.0 4.08e-01 81.2% 54.8%
4112955 304.107.1.1 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.67 54.0 3.72e-01 88.4% 61.7%
4024043 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.67 50.0 3.77e-01 81.2% 58.9%
4169309 304.107.1.0 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain 0.67 55.0 3.74e-01 89.9% 61.2%
4943575 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.67 50.0 4.06e-01 82.6% 59.3%
3733542 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.67 50.0 3.81e-01 81.2% 58.2%
3635583 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.66 49.0 3.60e-01 81.2% 67.0%
5044631 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 48.0 3.94e-01 78.3% 63.1%
3931143 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.66 48.0 3.99e-01 78.3% 60.8%
4558763 223.2.1.20 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 0.66 47.0 3.83e-01 76.8% 57.8%
4945857 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 48.0 4.03e-01 79.7% 64.8%
3686556 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 51.0 4.20e-01 85.5% 77.6%
3451165 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.65 48.0 3.75e-01 79.7% 100.0%
3704074 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.64 50.0 3.85e-01 87.0% 55.2%
5069893 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 52.0 4.16e-01 89.9% 67.9%
4971095 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 49.0 4.10e-01 85.5% 64.8%
4979823 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 47.0 4.23e-01 81.2% 81.0%
5047389 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 47.0 3.83e-01 79.7% 61.5%
4940035 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 46.0 4.02e-01 79.7% 67.3%
3249304 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.63 55.0 4.30e-01 98.6% 66.7%
3657096 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.63 47.0 3.54e-01 79.7% 57.6%
3983387 223.1.1.57 a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif 0.62 51.0 3.97e-01 91.3% 52.9%
3185560 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.62 45.0 3.44e-01 79.7% 93.3%
3550732 223.2.1.20 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 0.61 49.0 3.97e-01 88.4% 62.2%
5053387 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 46.0 3.75e-01 82.6% 57.1%
4109482 223.1.1.182 a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3369 0.59 47.0 3.64e-01 91.3% 62.9%
3379086 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.58 48.0 3.26e-01 94.2% 44.8%
4998374 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 42.0 3.57e-01 81.2% 62.4%
3626902 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.57 47.0 3.84e-01 92.8% 63.7%
4050037 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 47.0 4.21e-01 97.1% 65.0%
3741227 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 45.0 3.19e-01 94.2% 45.4%
3697589 223.1.1.94 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS-like 0.56 45.0 3.82e-01 89.9% 88.3%
3656626 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 44.0 2.90e-01 89.9% 21.2%
5053041 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 40.0 3.41e-01 82.6% 64.4%
5066585 881.2.1.0 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.55 46.0 3.85e-01 97.1% 70.8%
4985633 75.1.1.4 beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like 0.55 40.0 3.34e-01 100.0% 41.5%
4059572 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.55 45.0 3.98e-01 95.7% 64.5%
5058449 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.55 45.0 3.91e-01 95.7% 87.8%
4127810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.54 46.0 3.98e-01 100.0% 85.0%
3458058 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.54 41.0 3.45e-01 84.1% 71.2%
5061536 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.54 33.0 2.91e-01 89.9% 41.7%
3787155 10.12.1.53 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.54 46.0 3.24e-01 95.7% 82.7%
4958580 306.6.1.5 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › DUF2113 0.54 39.0 3.86e-01 97.1% 74.7%
4029041 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 39.0 3.34e-01 79.7% 66.7%
3775073 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 43.0 3.02e-01 92.8% 48.5%
4990493 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.53 38.0 3.60e-01 76.8% 65.9%
5027606 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.53 45.0 3.81e-01 100.0% 88.0%
3188864 10.12.1.51 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 0.53 43.0 3.15e-01 94.2% 69.8%
3593442 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 45.0 3.97e-01 97.1% 84.8%
3672811 2003.1.5.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase 0.53 41.0 2.67e-01 87.0% 65.3%
3738044 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.53 42.0 2.88e-01 92.8% 24.1%
3725076 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 40.0 3.44e-01 81.2% 86.2%
3588223 304.156.1.0 a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain 0.52 40.0 3.74e-01 88.4% 88.9%
3967521 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 42.0 3.40e-01 95.7% 78.7%
163527 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.51 42.0 3.66e-01 91.3% 68.8%
4954535 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.51 44.0 4.02e-01 100.0% 77.9%
3771405 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 42.0 3.30e-01 95.7% 78.8%
149114 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.51 41.0 3.58e-01 91.3% 68.2%
4977674 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.51 41.0 3.00e-01 95.7% 32.7%
3739949 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.50 39.0 3.76e-01 91.3% 72.9%
3328156 2003.1.5.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase 0.50 42.0 3.00e-01 95.7% 41.1%
1162196 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.50 41.0 3.52e-01 91.3% 64.3%
D2 medium residues 1-53
PDB
Domain cluster: representative