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IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023642
Arc-VirIMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023642
Identity
- Kingdom:
- archaea
Quality
96.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-136
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ktqA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 65.0 | 4.83e-01 | 98.3% | 52.3% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 63.0 | 4.66e-01 | 98.3% | 64.4% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 63.0 | 5.14e-01 | 100.0% | 95.6% |
| 4exbB00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.67 | 53.0 | 4.11e-01 | 92.2% | 38.0% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 44.0 | 3.35e-01 | 72.2% | 29.7% |
| 3b4uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 60.0 | 4.45e-01 | 98.3% | 56.1% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 40.0 | 4.29e-01 | 78.3% | 69.8% |
| 6bveA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 59.0 | 4.65e-01 | 98.3% | 65.7% |
| 1nvmA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 59.0 | 4.51e-01 | 99.1% | 56.3% |
| 4mwaA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.66 | 59.0 | 4.52e-01 | 98.3% | 51.2% |
| 4s3jB02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 57.0 | 4.36e-01 | 98.3% | 64.7% |
| 5d84A02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 41.0 | 4.17e-01 | 79.1% | 65.8% |
| 3vvbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 57.0 | 4.33e-01 | 100.0% | 85.6% |
| 1o89A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 39.0 | 3.44e-01 | 80.0% | 41.9% |
| 2ejaA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.63 | 56.0 | 4.00e-01 | 98.3% | 71.2% |
| 7ympE01 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.62 | 50.0 | 3.75e-01 | 98.3% | 35.1% |
| 5z5cA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 39.0 | 4.07e-01 | 79.1% | 66.7% |
| 1vpqA00 | 3.20.20.410 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 | 0.62 | 55.0 | 4.22e-01 | 98.3% | 57.3% |
| 2ffiA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 56.0 | 4.20e-01 | 99.1% | 79.9% |
| 5lddC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 51.0 | 4.49e-01 | 89.6% | 95.2% |
| 3p26A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 54.0 | 4.34e-01 | 98.3% | 67.1% |
| 4ku4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 51.0 | 4.44e-01 | 90.4% | 95.9% |
| 3ru6B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 52.0 | 4.19e-01 | 98.3% | 65.8% |
| 3nkdA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.58 | 40.0 | 4.52e-01 | 88.7% | 96.4% |
| 5jipA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 52.0 | 4.16e-01 | 99.1% | 67.0% |
| 1kjnA00 | 3.40.50.10160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like | 0.58 | 47.0 | 4.28e-01 | 87.8% | 84.2% |
| 2q0xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 49.0 | 3.69e-01 | 94.8% | 93.4% |
| 3sy8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 47.0 | 4.49e-01 | 89.6% | 97.8% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 50.0 | 4.38e-01 | 98.3% | 93.7% |
| 3nwoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 48.0 | 3.63e-01 | 96.5% | 94.6% |
| 3eqzB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 45.0 | 4.44e-01 | 87.8% | 83.2% |
| 3ohsX01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 4.50e-01 | 87.8% | 99.2% |
| 2cb0A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 41.0 | 3.79e-01 | 98.3% | 59.2% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.55 | 49.0 | 4.57e-01 | 98.3% | 92.3% |
| 3f4lA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 4.49e-01 | 88.7% | 98.3% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.27e-01 | 87.8% | 91.0% |
| 3rc1A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 4.31e-01 | 89.6% | 94.4% |
| 3evnA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 4.43e-01 | 88.7% | 99.1% |
| 4djaA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 39.0 | 3.50e-01 | 76.5% | 79.1% |
| 2wsiA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 39.0 | 3.01e-01 | 79.1% | 43.9% |
| 1xezA01 | 3.30.110.130 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain | 0.52 | 33.0 | 3.84e-01 | 87.0% | 91.4% |
| 7e76B01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 45.0 | 3.89e-01 | 98.3% | 59.2% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 45.0 | 3.71e-01 | 98.3% | 99.6% |
| 3gffA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.39e-01 | 100.0% | 87.7% |
| 2nutA03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 45.0 | 3.54e-01 | 98.3% | 87.4% |
| 1rljA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 46.0 | 4.36e-01 | 98.3% | 86.7% |
| 3fkqA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.60e-01 | 99.1% | 70.0% |
| 2hjhB01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.51 | 41.0 | 3.43e-01 | 87.0% | 79.2% |
| 1sqsA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 44.0 | 3.61e-01 | 100.0% | 79.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3955139 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 73.0 | 5.25e-01 | 100.0% | 47.4% |
| 5043861 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 71.0 | 5.57e-01 | 98.3% | 52.8% |
| 4955591 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 70.0 | 4.93e-01 | 98.3% | 38.4% |
| 4929206 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 70.0 | 4.95e-01 | 98.3% | 40.0% |
| 5025578 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.75 | 69.0 | 4.82e-01 | 100.0% | 49.2% |
| 5050095 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.75 | 69.0 | 5.14e-01 | 99.1% | 44.0% |
| 4514960 | 2002.1.1.125 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM | 0.75 | 68.0 | 4.65e-01 | 99.1% | 35.6% |
| 5004847 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.75 | 68.0 | 4.64e-01 | 100.0% | 34.8% |
| 2439603 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 68.0 | 5.37e-01 | 100.0% | 58.2% |
| 5032526 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 66.0 | 4.73e-01 | 99.1% | 39.4% |
| 4970882 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 63.0 | 4.52e-01 | 97.4% | 59.8% |
| 3386734 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.68 | 60.0 | 4.46e-01 | 98.3% | 57.3% |
| 3378761 | 2002.1.1.53 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N | 0.68 | 62.0 | 5.60e-01 | 99.1% | 82.5% |
| 3503713 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.65 | 59.0 | 4.27e-01 | 98.3% | 64.2% |
| 4483616 | 2004.1.1.61 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FTHFS | 0.62 | 56.0 | 3.60e-01 | 100.0% | 60.3% |
| 5001231 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 52.0 | 4.34e-01 | 89.6% | 78.5% |
| 5016101 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.61 | 54.0 | 3.75e-01 | 98.3% | 39.0% |
| 3712835 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 54.0 | 4.46e-01 | 98.3% | 87.8% |
| 4351028 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.60 | 54.0 | 4.47e-01 | 98.3% | 77.5% |
| 3937765 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.60 | 44.0 | 3.81e-01 | 75.7% | 69.1% |
| 5067504 | 2002.1.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Enolase_C | 0.59 | 52.0 | 4.01e-01 | 98.3% | 75.6% |
| 986251 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.58 | 48.0 | 4.61e-01 | 89.6% | 100.0% |
| 4973115 | 2002.1.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Enolase_C | 0.58 | 49.0 | 3.76e-01 | 100.0% | 38.6% |
| 1870502 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.58 | 52.0 | 4.17e-01 | 99.1% | 67.3% |
| 5061623 | 7516.1.1.26 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 | 0.57 | 38.0 | 2.77e-01 | 87.0% | 24.3% |
| 5046104 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 50.0 | 4.41e-01 | 100.0% | 91.2% |
| 3217236 | 2007.9.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › MAP3K_TRAF_bd+DRHyd-ASK | 0.56 | 50.0 | 4.30e-01 | 98.3% | 88.9% |
| 3580801 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.54 | 44.0 | 4.13e-01 | 88.7% | 84.8% |
| 5048917 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.54 | 48.0 | 3.88e-01 | 98.3% | 62.3% |
| 3668451 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.53 | 40.0 | 3.33e-01 | 79.1% | 49.5% |
| 3990082 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.53 | 47.0 | 3.73e-01 | 98.3% | 74.5% |
| 4980005 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.53 | 44.0 | 4.44e-01 | 90.4% | 100.0% |
| 4682183 | 7579.1.1.99 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4, Abhydrolase_6 | 0.53 | 46.0 | 3.27e-01 | 98.3% | 65.4% |
| 3277407 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.53 | 43.0 | 3.25e-01 | 92.2% | 37.0% |
| 3515566 | 109.4.1.403 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Foie-gras_1 | 0.53 | 43.0 | 3.06e-01 | 88.7% | 43.4% |
| 3733155 | 2003.1.1.142 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR, adh_short_C2 | 0.52 | 47.0 | 3.56e-01 | 100.0% | 92.7% |
| 3753158 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.52 | 46.0 | 4.23e-01 | 98.3% | 81.3% |
| None | — | 0.52 | 45.0 | 3.37e-01 | 99.1% | 70.6% | |
| 3829199 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.51 | 41.0 | 4.07e-01 | 87.0% | 88.8% |
| 3290907 | 2007.2.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 | 0.51 | 44.0 | 3.78e-01 | 98.3% | 84.1% |