←Back to structures
IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023668
Arc-VirIMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023668
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-19_84-156
Domain cluster:
rep: IMGVR_UViG_3300025145_000083-3300025145-Ga0209609_100013567__D3-15_79-153
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.74 | 57.0 | 5.04e-01 | 81.8% | 64.8% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.73 | 67.0 | 5.54e-01 | 100.0% | 70.5% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.69 | 49.0 | 4.18e-01 | 78.4% | 46.5% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.66 | 57.0 | 5.02e-01 | 93.2% | 87.2% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.66 | 53.0 | 4.78e-01 | 98.9% | 62.4% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.65 | 49.0 | 3.56e-01 | 80.7% | 29.2% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 37.0 | 3.30e-01 | 71.6% | 40.8% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.61 | 46.0 | 4.09e-01 | 78.4% | 60.2% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 38.0 | 3.27e-01 | 76.1% | 41.4% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 38.0 | 3.36e-01 | 76.1% | 43.2% |
| 2wiqA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.59 | 51.0 | 3.80e-01 | 96.6% | 37.8% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 38.0 | 3.85e-01 | 72.7% | 64.8% |
| 1i7dA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.58 | 46.0 | 3.87e-01 | 83.0% | 52.5% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.58 | 50.0 | 4.13e-01 | 96.6% | 52.5% |
| 1vqqA01 | 3.10.450.100 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 | 0.57 | 38.0 | 3.55e-01 | 81.8% | 54.1% |
| 3f83A03 | 2.60.40.2040 | Mainly Beta › Sandwich › Immunoglobulin-like › CFA/I fimbrial subunit E, pilin domain | 0.56 | 49.0 | 4.12e-01 | 98.9% | 96.1% |
| 3hk4A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 35.0 | 3.17e-01 | 72.7% | 45.8% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 48.0 | 3.96e-01 | 96.6% | 62.6% |
| 2gtlN02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 47.0 | 3.87e-01 | 95.5% | 60.6% |
| 1bp1A01 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.56 | 49.0 | 3.93e-01 | 100.0% | 71.7% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.56 | 49.0 | 4.53e-01 | 97.7% | 89.3% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 39.0 | 3.41e-01 | 96.6% | 48.9% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 49.0 | 3.97e-01 | 98.9% | 54.0% |
| 4ph8A00 | 2.60.40.2910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 48.0 | 4.09e-01 | 100.0% | 96.0% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.54 | 44.0 | 3.83e-01 | 87.5% | 82.2% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.28e-01 | 76.1% | 48.1% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 33.0 | 2.92e-01 | 76.1% | 40.0% |
| 3hn3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 47.0 | 4.51e-01 | 98.9% | 97.1% |
| 3butA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 47.0 | 4.24e-01 | 98.9% | 96.8% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 36.0 | 3.03e-01 | 72.7% | 39.0% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 40.0 | 3.62e-01 | 78.4% | 86.1% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.53 | 34.0 | 3.88e-01 | 86.4% | 100.0% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 41.0 | 3.57e-01 | 96.6% | 53.9% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 40.0 | 3.45e-01 | 84.1% | 89.3% |
| 3ef8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.04e-01 | 72.7% | 41.9% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.15e-01 | 76.1% | 47.0% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.52 | 45.0 | 3.73e-01 | 100.0% | 60.4% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 39.0 | 3.43e-01 | 94.3% | 51.0% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.34e-01 | 83.0% | 51.0% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.83e-01 | 87.5% | 90.3% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.52 | 45.0 | 3.69e-01 | 97.7% | 61.6% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 33.0 | 2.89e-01 | 72.7% | 40.1% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 3.09e-01 | 72.7% | 45.3% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.76e-01 | 85.2% | 76.1% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.25e-01 | 76.1% | 50.4% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 32.0 | 2.94e-01 | 72.7% | 46.3% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.50 | 43.0 | 4.01e-01 | 97.7% | 88.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838697 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.78 | 61.0 | 4.72e-01 | 83.0% | 48.6% |
| 3969030 | 7503.1.1.13 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 | 0.78 | 61.0 | 4.84e-01 | 83.0% | 49.4% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.75 | 65.0 | 5.22e-01 | 95.5% | 60.6% |
| 5001466 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.74 | 65.0 | 4.30e-01 | 95.5% | 37.6% |
| 5041649 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.73 | 57.0 | 4.09e-01 | 81.8% | 36.5% |
| 4556738 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.71 | 55.0 | 4.01e-01 | 83.0% | 85.2% |
| 4492722 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.71 | 54.0 | 4.61e-01 | 80.7% | 58.6% |
| 5025337 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.71 | 54.0 | 4.03e-01 | 79.5% | 39.5% |
| 4990857 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.71 | 63.0 | 4.32e-01 | 97.7% | 45.4% |
| 5043104 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.71 | 54.0 | 4.68e-01 | 81.8% | 61.5% |
| 5071837 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.70 | 54.0 | 4.60e-01 | 81.8% | 59.3% |
| 5073160 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.70 | 53.0 | 4.63e-01 | 80.7% | 63.1% |
| 5078009 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.70 | 62.0 | 4.10e-01 | 98.9% | 25.4% |
| 3554855 | 7504.1.1.3 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Maf | 0.69 | 53.0 | 3.97e-01 | 80.7% | 95.7% |
| 5001271 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.68 | 53.0 | 4.60e-01 | 81.8% | 60.8% |
| 5044859 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.68 | 51.0 | 3.76e-01 | 80.7% | 33.9% |
| 4971335 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.67 | 52.0 | 3.83e-01 | 83.0% | 34.3% |
| 4941441 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.67 | 52.0 | 4.66e-01 | 81.8% | 65.8% |
| 5043164 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.66 | 52.0 | 3.78e-01 | 83.0% | 33.9% |
| 5056410 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.66 | 58.0 | 4.00e-01 | 98.9% | 41.6% |
| 4975538 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.66 | 51.0 | 3.75e-01 | 80.7% | 36.3% |
| 5032376 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 56.0 | 3.99e-01 | 95.5% | 42.1% |
| 4022153 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.65 | 45.0 | 3.81e-01 | 87.5% | 43.4% |
| 3284948 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 50.0 | 5.07e-01 | 81.8% | 84.7% |
| 3628355 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 56.0 | 3.86e-01 | 100.0% | 47.0% |
| 5046602 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.63 | 49.0 | 3.68e-01 | 83.0% | 37.2% |
| 3659467 | 243.1.1.45 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › S6PP_C | 0.60 | 37.0 | 3.32e-01 | 71.6% | 44.0% |
| 4193401 | 243.1.1.34 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like | 0.60 | 37.0 | 3.49e-01 | 72.7% | 50.0% |
| 5033004 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 52.0 | 4.74e-01 | 100.0% | 96.7% |
| 5034852 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 51.0 | 4.44e-01 | 100.0% | 89.2% |
| 4259027 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.56 | 48.0 | 4.31e-01 | 95.5% | 81.3% |
| 861 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.56 | 47.0 | 4.23e-01 | 95.5% | 80.5% |
| 4371290 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.56 | 48.0 | 4.28e-01 | 95.5% | 81.5% |
| 3687369 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.55 | 37.0 | 3.63e-01 | 94.3% | 62.0% |
| 4097328 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.55 | 46.0 | 4.20e-01 | 96.6% | 81.6% |
| 3941713 | 243.1.1.6 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 | 0.55 | 40.0 | 3.39e-01 | 76.1% | 51.4% |
| 3892768 | 11.1.1.1054 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26562 | 0.54 | 48.0 | 4.36e-01 | 98.9% | 93.3% |
| 3540628 | 11.1.1.917 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30052 | 0.54 | 47.0 | 4.12e-01 | 97.7% | 96.3% |
| 3959285 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 36.0 | 3.76e-01 | 76.1% | 73.8% |
| 3239943 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 3.92e-01 | 100.0% | 98.8% |
| 3591282 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 36.0 | 3.29e-01 | 75.0% | 50.4% |
| 3958465 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 36.0 | 3.03e-01 | 76.1% | 40.7% |
| 3914493 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.53 | 47.0 | 2.85e-01 | 98.9% | 74.7% |
| 3288890 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 36.0 | 3.20e-01 | 76.1% | 47.7% |
| 3928044 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 46.0 | 3.64e-01 | 100.0% | 95.3% |
| 4074364 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 34.0 | 3.05e-01 | 72.7% | 46.2% |
| 3717566 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.51 | 36.0 | 2.66e-01 | 77.3% | 25.1% |
D2
high
residues 24-80
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p1eA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.66 | 56.0 | 3.63e-01 | 100.0% | 79.1% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 46.0 | 3.72e-01 | 75.4% | 70.7% |
| 5zi2A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.63 | 52.0 | 3.66e-01 | 94.7% | 37.1% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 40.0 | 2.79e-01 | 71.9% | 82.4% |
| 1gc5A01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 44.0 | 2.65e-01 | 82.5% | 16.7% |
| 2ccqA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 42.0 | 3.60e-01 | 91.2% | 100.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4059365 | 3016.1.1.19 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › KYNU_C | 0.65 | 50.0 | 3.92e-01 | 84.2% | 75.2% |
| 4017595 | 306.10.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF28980 | 0.64 | 46.0 | 3.63e-01 | 77.2% | 68.8% |
| 4959161 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.55 | 46.0 | 3.79e-01 | 94.7% | 66.7% |
| 4183370 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.52 | 46.0 | 3.04e-01 | 98.2% | 82.6% |
| 4978790 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 45.0 | 3.67e-01 | 100.0% | 55.6% |
| 4996621 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.45e-01 | 91.2% | 93.0% |