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IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023672

Arc-Vir

IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023672

Quality

91.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-81
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.79 71.0 5.33e-01 100.0% 67.5%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 60.0 4.95e-01 85.5% 91.7%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.75 61.0 4.96e-01 88.4% 85.9%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 59.0 4.57e-01 87.0% 85.1%
3g16B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 59.0 4.59e-01 89.9% 78.3%
3grdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 57.0 4.59e-01 87.0% 83.3%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 56.0 4.59e-01 87.0% 84.0%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 55.0 4.70e-01 82.6% 88.1%
4blqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 49.0 3.27e-01 72.5% 64.8%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 55.0 4.55e-01 85.5% 90.5%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 56.0 4.49e-01 87.0% 86.7%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 53.0 4.23e-01 82.6% 78.9%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 55.0 4.43e-01 85.5% 83.5%
4mjdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 54.0 4.57e-01 84.1% 85.8%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.69 59.0 3.85e-01 92.8% 27.9%
1nu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 61.0 4.76e-01 98.6% 77.2%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 54.0 4.32e-01 87.0% 72.1%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 60.0 4.52e-01 100.0% 62.7%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 52.0 3.29e-01 84.1% 25.2%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 51.0 4.93e-01 82.6% 86.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 5.12e-01 100.0% 87.3%
1s5aB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 57.0 4.56e-01 98.6% 83.9%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 58.0 4.56e-01 100.0% 89.2%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 56.0 4.20e-01 100.0% 59.8%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.95e-01 100.0% 87.1%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 49.0 4.09e-01 85.5% 82.9%
3dmcA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 49.0 4.09e-01 87.0% 78.4%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.63 56.0 4.83e-01 100.0% 90.8%
2zxqA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 52.0 3.52e-01 94.2% 76.0%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 52.0 3.54e-01 94.2% 76.0%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 55.0 4.52e-01 100.0% 87.5%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 52.0 3.52e-01 92.8% 31.2%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 52.0 4.23e-01 100.0% 68.9%
2h2yA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.62 53.0 4.55e-01 100.0% 80.2%
4hn7A00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 47.0 4.43e-01 91.3% 68.2%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.04e-01 100.0% 56.0%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 51.0 4.15e-01 100.0% 71.3%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.60 46.0 4.33e-01 85.5% 96.6%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 53.0 4.14e-01 100.0% 63.6%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 52.0 3.98e-01 100.0% 64.7%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.59 48.0 4.10e-01 94.2% 87.0%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 47.0 3.25e-01 92.8% 92.3%
2rsxA00 3.10.450.420 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 50.0 3.87e-01 98.6% 91.8%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 48.0 3.87e-01 100.0% 62.9%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.58 46.0 3.40e-01 91.3% 40.5%
4bwkB01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 46.0 3.16e-01 89.9% 62.3%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.81e-01 98.6% 82.2%
3sluB01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.92e-01 82.6% 84.6%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.56 39.0 4.19e-01 73.9% 98.2%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 3.73e-01 100.0% 55.5%
2r39A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.13e-01 97.1% 90.8%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.79e-01 89.9% 86.5%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 43.0 2.98e-01 94.2% 85.3%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 38.0 3.19e-01 73.9% 48.8%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.54 39.0 3.06e-01 100.0% 33.1%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.53 42.0 3.49e-01 91.3% 48.8%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 44.0 3.58e-01 100.0% 68.8%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.52 36.0 3.74e-01 73.9% 86.2%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.51 36.0 2.76e-01 78.3% 42.4%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3221974 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.77 61.0 5.23e-01 84.1% 93.3%
3214215 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.74 58.0 4.88e-01 84.1% 82.5%
3285952 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.73 58.0 4.75e-01 87.0% 84.6%
3818701 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.73 58.0 4.80e-01 85.5% 63.3%
3933168 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.73 63.0 4.68e-01 97.1% 63.3%
3587998 243.1.1.102 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF28180 0.73 56.0 4.91e-01 84.1% 87.6%
3808505 243.3.1.1 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.70 55.0 5.12e-01 84.1% 91.8%
4436162 243.1.1.34 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.70 55.0 4.49e-01 85.5% 99.2%
4568161 283.2.1.18 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Lipoprotein_17 0.69 47.0 4.45e-01 73.9% 60.0%
3246120 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.68 60.0 4.39e-01 100.0% 60.3%
3802950 243.3.1.26 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › protein_MS5 0.67 56.0 3.96e-01 94.2% 93.3%
3260045 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.65 45.0 4.44e-01 81.2% 66.7%
5070134 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.64 52.0 3.29e-01 89.9% 32.0%
3618632 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.64 52.0 3.33e-01 89.9% 80.0%
3691111 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 55.0 4.21e-01 100.0% 58.4%
3980770 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.63 48.0 3.72e-01 84.1% 40.0%
4383382 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.63 52.0 3.79e-01 89.9% 57.3%
3640021 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.63 48.0 2.97e-01 84.1% 26.0%
4025923 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.63 48.0 4.59e-01 84.1% 85.0%
3376518 331.3.1.43 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C 0.62 53.0 3.69e-01 97.1% 57.6%
5075303 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.62 52.0 3.73e-01 100.0% 40.0%
4199183 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 54.0 4.24e-01 98.6% 87.6%
2555846 7579.1.1.49 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung 0.60 49.0 3.13e-01 95.7% 43.8%
3243080 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.60 50.0 4.56e-01 100.0% 81.0%
4873984 331.3.1.1 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.60 50.0 4.06e-01 100.0% 72.3%
5008812 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.59 49.0 4.25e-01 94.2% 59.0%
3278559 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.59 51.0 3.90e-01 100.0% 90.0%
2390919 7579.1.1.49 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung 0.59 48.0 3.08e-01 95.7% 42.1%
3096198 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.58 47.0 4.17e-01 95.7% 83.3%
3931011 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 44.0 3.72e-01 94.2% 46.9%
3472467 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.57 47.0 4.60e-01 94.2% 89.3%
3718216 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.56 48.0 4.04e-01 100.0% 83.2%
3974176 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.56 44.0 2.77e-01 91.3% 15.8%
3456551 331.3.1.43 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C 0.56 47.0 3.33e-01 100.0% 60.4%
3804776 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 41.0 2.76e-01 84.1% 23.5%
5052092 7515.1.1.6 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest 0.54 46.0 2.83e-01 100.0% 35.8%
3932463 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.54 43.0 2.99e-01 92.8% 23.3%
None 0.54 45.0 3.10e-01 98.6% 28.6%
5046132 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.54 37.0 2.60e-01 72.5% 34.9%
3512069 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.54 42.0 3.16e-01 91.3% 35.0%
3945603 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.53 41.0 2.62e-01 91.3% 15.8%
3274838 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 44.0 3.70e-01 98.6% 70.0%
1169934 71.1.1.5 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF576 0.53 45.0 3.94e-01 100.0% 61.9%
4928436 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 40.0 3.31e-01 89.9% 50.3%
4025220 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.52 40.0 2.68e-01 91.3% 33.8%
3265961 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.51 44.0 3.29e-01 100.0% 87.9%
3576881 3347.1.1.0 beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 0.51 41.0 3.72e-01 92.8% 77.0%
4082864 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 44.0 3.90e-01 100.0% 81.9%
4346250 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.51 43.0 3.53e-01 100.0% 82.9%