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IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023685

Arc-Vir

IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023685

Quality

68.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-83
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.75 60.0 5.70e-01 97.5% 72.9%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.74 54.0 4.55e-01 76.5% 68.5%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.72 63.0 5.38e-01 98.8% 84.3%
2z0fA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.71 60.0 5.54e-01 92.6% 82.4%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.71 58.0 5.55e-01 93.8% 77.1%
4my0A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 50.0 4.15e-01 80.2% 66.4%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 49.0 3.45e-01 79.0% 39.7%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 49.0 3.94e-01 92.6% 41.7%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 45.0 2.88e-01 74.1% 26.4%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 44.0 2.88e-01 71.6% 23.7%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.60 53.0 4.71e-01 100.0% 84.9%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.60 45.0 4.64e-01 87.7% 82.3%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.60 51.0 3.51e-01 96.3% 96.6%
2xvlA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.59 46.0 3.34e-01 85.2% 91.9%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 51.0 3.57e-01 97.5% 80.7%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 41.0 2.77e-01 72.8% 25.1%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.58 51.0 3.52e-01 100.0% 93.1%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 51.0 3.50e-01 100.0% 65.5%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 48.0 3.37e-01 96.3% 72.1%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 49.0 3.38e-01 97.5% 78.1%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.57 42.0 3.42e-01 77.8% 65.4%
2y3vD00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.57 41.0 3.30e-01 75.3% 100.0%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 41.0 3.57e-01 100.0% 50.8%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.68e-01 81.5% 87.9%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.55 48.0 3.64e-01 97.5% 90.5%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 46.0 4.08e-01 92.6% 100.0%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 38.0 3.95e-01 72.8% 81.8%
2ovsA00 2.40.128.380 Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR 0.55 47.0 4.22e-01 98.8% 71.2%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 46.0 3.31e-01 92.6% 92.5%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 3.90e-01 98.8% 92.6%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.94e-01 91.4% 88.6%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 46.0 4.31e-01 93.8% 84.8%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 43.0 3.11e-01 88.9% 88.6%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 47.0 3.57e-01 100.0% 81.9%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 2.84e-01 88.9% 96.4%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.97e-01 96.3% 100.0%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.53 40.0 3.42e-01 82.7% 63.3%
1cqaA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 45.0 3.99e-01 98.8% 86.2%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.00e-01 93.8% 95.0%
3fy6A01 3.30.2210.10 Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily 0.52 41.0 3.88e-01 90.1% 78.5%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.52 44.0 4.06e-01 93.8% 78.3%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 43.0 3.43e-01 91.4% 92.7%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.51 44.0 3.16e-01 98.8% 99.6%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 43.0 3.91e-01 97.5% 99.2%
3agkA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.51 38.0 3.29e-01 100.0% 50.8%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 45.0 3.89e-01 100.0% 100.0%
1b8pA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.51 45.0 3.55e-01 100.0% 47.1%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3739664 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.85 63.0 6.75e-01 100.0% 90.0%
3628751 331.18.1.0 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc 0.82 74.0 5.60e-01 100.0% 43.2%
5053646 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.81 64.0 6.36e-01 91.4% 81.2%
3973141 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.77 62.0 6.07e-01 95.1% 80.0%
4178706 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.76 59.0 5.67e-01 98.8% 72.6%
3403609 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.75 62.0 6.30e-01 100.0% 91.1%
184669 331.2.1.2 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF2218 0.75 60.0 5.70e-01 97.5% 72.9%
3550365 331.23.1.2 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C 0.74 60.0 6.11e-01 100.0% 89.7%
3409029 331.23.1.2 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C 0.73 59.0 6.16e-01 100.0% 94.6%
5007802 331.4.1.36 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 0.72 58.0 5.88e-01 92.6% 87.5%
3869277 331.18.1.0 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc 0.72 63.0 4.87e-01 100.0% 48.1%
4123723 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.72 59.0 5.49e-01 93.8% 72.0%
3332318 331.2.1.11 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › COR-B 0.70 59.0 4.57e-01 95.1% 45.3%
3971924 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.70 56.0 5.57e-01 85.2% 85.7%
3934099 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.70 58.0 5.62e-01 93.8% 80.0%
3197066 5.1.4.116 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.70 48.0 3.06e-01 71.6% 22.9%
4995617 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.70 56.0 5.52e-01 96.3% 82.0%
4031431 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.70 47.0 5.13e-01 81.5% 86.2%
3610662 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 48.0 3.30e-01 71.6% 47.2%
3805333 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.69 59.0 4.48e-01 96.3% 42.5%
3999577 4099.1.1.28 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.68 54.0 5.34e-01 93.8% 82.4%
4941285 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.67 48.0 5.10e-01 91.4% 88.6%
4486690 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.66 46.0 2.98e-01 71.6% 26.6%
3581366 74.1.1.0 beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.66 45.0 2.78e-01 71.6% 15.5%
3617987 4099.1.1.28 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.66 53.0 5.27e-01 92.6% 83.5%
3244769 4099.1.1.28 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.64 52.0 5.06e-01 95.1% 80.0%
3698130 216.1.1.14 a+b two layers › UBC-like › UBC-like › UBC-like › Med1 0.64 56.0 5.13e-01 97.5% 86.7%
5053431 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.63 49.0 3.94e-01 82.7% 51.6%
4284036 4099.1.1.26 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.62 49.0 4.57e-01 86.4% 70.5%
3729944 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.62 55.0 4.94e-01 97.5% 83.6%
3281830 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 53.0 4.50e-01 100.0% 98.5%
3974608 7515.1.1.0 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like 0.58 50.0 3.27e-01 100.0% 79.5%
3739291 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.58 43.0 2.84e-01 77.8% 36.8%
2538976 12.3.1.25 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.57 49.0 3.36e-01 97.5% 93.4%
4929825 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 45.0 3.99e-01 87.7% 98.3%
3492308 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.55 43.0 2.76e-01 85.2% 93.3%
2130268 4099.1.1.7 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Ctf19_RWD1 0.55 39.0 3.91e-01 76.5% 84.7%
3744348 5.1.4.331 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30861 0.54 47.0 2.84e-01 92.6% 26.8%
185625 4099.1.1.7 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Ctf19_RWD1 0.54 40.0 3.61e-01 80.2% 57.6%
5012791 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 45.0 3.74e-01 93.8% 66.7%
5000881 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 46.0 3.82e-01 98.8% 89.7%
3259368 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.53 47.0 2.95e-01 100.0% 77.0%
3870514 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.53 43.0 3.84e-01 87.7% 86.1%
3490881 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 45.0 4.03e-01 98.8% 100.0%
3614189 5.1.4.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.53 42.0 2.87e-01 84.0% 99.6%
3549654 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 47.0 2.58e-01 96.3% 25.4%
4237069 295.1.1.12 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 0.52 45.0 3.89e-01 95.1% 91.9%
3708791 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.52 41.0 3.13e-01 90.1% 41.4%
3520661 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.43e-01 82.7% 54.5%
3763965 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.51 45.0 2.93e-01 96.3% 94.4%
3710731 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.51 46.0 3.60e-01 100.0% 59.4%
3844573 5.1.3.170 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.51 45.0 2.93e-01 96.3% 95.7%
3597933 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 46.0 3.52e-01 100.0% 61.4%
3173088 223.2.1.19 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.50 39.0 3.15e-01 84.0% 76.9%
D2 high residues 277-482
PDB