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IMGVR_UViG_3300009645_000049-3300009645-Ga0116106_10011912
Arc-VirIMGVR_UViG_3300009645_000049-3300009645-Ga0116106_10011912
Identity
- Kingdom:
- archaea
Quality
87.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-155
Domain cluster:
rep: IMGVR_UViG_2918192969_000001-2918192969-2918194533__D27-210
D2
medium
residues 164-329
Domain cluster:
rep: SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00165__D256-403
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 35.0 | 4.52e-01 | 83.7% | 89.0% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 27.0 | 3.34e-01 | 85.5% | 58.3% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 27.0 | 3.38e-01 | 83.7% | 63.1% |
| 2yskA00 | 1.10.490.110 | Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 | 0.61 | 39.0 | 4.19e-01 | 83.7% | 72.9% |
| 3fhnA03 | 1.10.357.100 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Dsl1p vesicle tethering complex, Tip20p subunit, domain C | 0.60 | 30.0 | 2.96e-01 | 88.6% | 43.1% |
| 4exjA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 28.0 | 3.29e-01 | 95.2% | 61.2% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.58 | 40.0 | 4.30e-01 | 77.1% | 79.7% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 30.0 | 3.75e-01 | 98.2% | 80.0% |
| 3n3wA00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.57 | 32.0 | 3.48e-01 | 95.2% | 63.2% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 33.0 | 3.78e-01 | 79.5% | 78.9% |
| 3ggyA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.55 | 41.0 | 3.99e-01 | 77.1% | 71.0% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.54 | 37.0 | 3.96e-01 | 88.6% | 77.7% |
| 1jmwA00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.54 | 30.0 | 3.21e-01 | 100.0% | 60.3% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 38.0 | 4.42e-01 | 73.5% | 100.0% |
| 1puoB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.53 | 35.0 | 3.73e-01 | 88.0% | 76.1% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 31.0 | 3.23e-01 | 100.0% | 62.4% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.51 | 31.0 | 3.50e-01 | 100.0% | 76.9% |
| 1hbgA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 36.0 | 3.84e-01 | 75.3% | 81.6% |
| 3l39A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 39.0 | 3.68e-01 | 79.5% | 68.5% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.50 | 37.0 | 3.56e-01 | 76.5% | 66.7% |
| 7dswA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.50 | 37.0 | 2.79e-01 | 76.5% | 65.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839835 | 3962.2.1.0 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › Helical domain in type ISP restriction-modification enzymes › Helical domain in type ISP restriction-modification enzymes | 0.92 | 69.0 | 7.83e-01 | 81.9% | 97.7% |
| 1687153 | 3962.2.1.1 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › Helical domain in type ISP restriction-modification enzymes › Helical domain in type ISP restriction-modification enzymes › ISP_coupler | 0.71 | 60.0 | 6.28e-01 | 98.2% | 100.0% |
| 3404059 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.59 | 35.0 | 4.12e-01 | 99.4% | 84.3% |
| 4397698 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.59 | 36.0 | 4.07e-01 | 98.2% | 81.7% |
| 3640046 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.58 | 54.0 | 5.31e-01 | 100.0% | 98.3% |
| 3212207 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 43.0 | 4.79e-01 | 83.1% | 100.0% |
| 5003564 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.56 | 31.0 | 2.98e-01 | 100.0% | 46.3% |
| 3207635 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.55 | 42.0 | 4.32e-01 | 79.5% | 96.2% |
| 3548233 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.54 | 42.0 | 4.25e-01 | 80.7% | 92.1% |
| 3579366 | 5054.1.1.63 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C | 0.54 | 41.0 | 3.90e-01 | 84.9% | 67.2% |
| 3587728 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.53 | 28.0 | 3.11e-01 | 76.5% | 62.4% |
| 3534658 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 43.0 | 4.41e-01 | 85.5% | 89.4% |
| 3784455 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.53 | 31.0 | 3.17e-01 | 77.7% | 56.5% |
| 3612806 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 41.0 | 4.26e-01 | 81.3% | 99.3% |
| 4960857 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 40.0 | 3.81e-01 | 98.2% | 67.5% |
| 5026162 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 46.0 | 3.92e-01 | 100.0% | 96.1% |
| 4987736 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 37.0 | 3.75e-01 | 97.6% | 75.8% |
| 3284002 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 40.0 | 3.78e-01 | 97.6% | 69.5% |
| 4032838 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 37.0 | 3.66e-01 | 97.6% | 71.1% |
D3
medium
residues 339-403
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.67 | 47.0 | 4.41e-01 | 72.3% | 68.4% |
| 2yvkA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.65 | 49.0 | 3.85e-01 | 84.6% | 39.9% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 45.0 | 3.46e-01 | 73.8% | 41.0% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 43.0 | 3.86e-01 | 73.8% | 75.3% |
| 2mpcA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 48.0 | 4.31e-01 | 100.0% | 63.3% |
| 4ojmX02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.58 | 48.0 | 4.14e-01 | 92.3% | 90.5% |
| 8g0lB01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 47.0 | 2.92e-01 | 89.2% | 19.7% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.58 | 47.0 | 3.95e-01 | 93.8% | 64.5% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 39.0 | 3.49e-01 | 70.8% | 58.9% |
| 4gyoA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 3.46e-01 | 98.5% | 30.0% |
| 4s2rQ03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 44.0 | 2.97e-01 | 90.8% | 96.0% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 42.0 | 3.86e-01 | 81.5% | 81.6% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.56 | 47.0 | 3.66e-01 | 96.9% | 78.8% |
| 5aioA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 44.0 | 3.33e-01 | 93.8% | 36.1% |
| 6ncvA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 43.0 | 3.93e-01 | 98.5% | 62.6% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 41.0 | 3.78e-01 | 81.5% | 90.7% |
| 5fzsA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 46.0 | 3.91e-01 | 95.4% | 57.0% |
| 7cc7A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 41.0 | 2.95e-01 | 86.2% | 43.0% |
| 3zn3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 44.0 | 3.03e-01 | 93.8% | 27.2% |
| 3mekA04 | 1.25.40.970 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 46.0 | 4.30e-01 | 100.0% | 85.0% |
| 3as5A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 3.17e-01 | 95.4% | 44.4% |
| 4gywA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 42.0 | 3.65e-01 | 95.4% | 79.0% |
| 1v07A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 41.0 | 3.61e-01 | 100.0% | 77.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572847 | 604.1.1.162 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4716 | 0.63 | 45.0 | 3.73e-01 | 75.4% | 69.6% |
| 3618198 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 3.99e-01 | 95.4% | 50.3% |
| None | — | 0.59 | 52.0 | 3.81e-01 | 100.0% | 39.5% | |
| 4015479 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 51.0 | 2.89e-01 | 100.0% | 9.6% |
| 3607671 | 3716.1.1.0 ↗ | alpha arrays › DUF3349 › DUF3349 › DUF3349 | 0.57 | 50.0 | 4.32e-01 | 100.0% | 79.0% |
| 3606878 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 48.0 | 3.56e-01 | 96.9% | 49.4% |
| 3491798 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.57 | 48.0 | 3.76e-01 | 96.9% | 72.0% |
| 3612350 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 48.0 | 4.21e-01 | 95.4% | 79.0% |
| 3708961 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 47.0 | 3.32e-01 | 93.8% | 35.5% |
| 3531423 | 5106.1.1.14 ↗ | extended segments › PetG subunit of the cytochrome b6f complex › PetG subunit of the cytochrome b6f complex › PetG subunit of the cytochrome b6f complex › TMEM174 | 0.55 | 38.0 | 4.09e-01 | 72.3% | 83.6% |
D4
medium
residues 404-475
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jzjA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 40.0 | 2.94e-01 | 70.8% | 23.4% |
| 8fumD01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 44.0 | 2.92e-01 | 97.2% | 37.9% |
| 7qqfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 44.0 | 2.98e-01 | 100.0% | 46.3% |
| 3uwpA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 45.0 | 3.13e-01 | 95.8% | 35.0% |
| 6r8gA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 43.0 | 3.54e-01 | 98.6% | 78.2% |
| 4eswA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 40.0 | 2.96e-01 | 94.4% | 92.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838861 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.90 | 84.0 | 5.04e-01 | 100.0% | 17.2% |
| 4974764 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.90 | 85.0 | 5.30e-01 | 100.0% | 21.5% |
| 3533570 | 7516.1.1.65 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fucokinase | 0.64 | 46.0 | 3.01e-01 | 77.8% | 74.0% |
| 3204793 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 50.0 | 3.60e-01 | 98.6% | 30.7% |
| 3995820 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.56 | 39.0 | 2.91e-01 | 95.8% | 26.7% |
| 3182714 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.56 | 41.0 | 3.29e-01 | 100.0% | 38.6% |
| 3520669 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 45.0 | 3.28e-01 | 98.6% | 43.0% |
D5
medium
residues 578-669
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838861 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.93 | 89.0 | 5.53e-01 | 100.0% | 21.9% |
| 4974764 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.93 | 84.0 | 5.45e-01 | 93.5% | 26.3% |
| 3959337 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.85 | 72.0 | 5.15e-01 | 89.1% | 36.3% |
D6
medium
residues 670-793
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18135.8 best | Type_ISP_C | 61.4 | 1.20e-16 | 95.2% | 32.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4974765 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.97 | 94.0 | 6.54e-01 | 100.0% | 37.0% |
| 3959350 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.77 | 66.0 | 6.21e-01 | 89.5% | 95.2% |
| 4033006 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.76 | 71.0 | 5.44e-01 | 100.0% | 53.5% |
D7
medium
residues 794-824_855-923
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18135.8 best | Type_ISP_C | 76.3 | 3.40e-21 | 99.0% | 33.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xwrC00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 32.0 | 3.60e-01 | 72.0% | 85.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4974765 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.97 | 94.0 | 6.17e-01 | 100.0% | 39.4% |
| 3838978 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.85 | 81.0 | 5.24e-01 | 100.0% | 28.6% |
| 3958563 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.83 | 72.0 | 5.30e-01 | 92.0% | 41.6% |
| 4033006 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.80 | 76.0 | 5.42e-01 | 100.0% | 38.8% |
D8
medium
residues 939-1023
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18135.8 best | Type_ISP_C | 58.3 | 1.00e-15 | 96.5% | 24.6% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x8xX02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.73 | 45.0 | 4.69e-01 | 85.9% | 68.4% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 5.11e-01 | 91.8% | 66.7% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 35.0 | 3.69e-01 | 90.6% | 52.5% |
| 3dsqA01 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 41.0 | 4.56e-01 | 90.6% | 88.7% |
| 3lk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 51.0 | 3.42e-01 | 96.5% | 31.5% |
| 7lscA01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 42.0 | 3.45e-01 | 77.6% | 62.4% |
| 2cjgA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 41.0 | 3.41e-01 | 87.1% | 60.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3958563 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.80 | 72.0 | 5.15e-01 | 98.8% | 52.1% |
| 1687154 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.78 | 71.0 | 4.57e-01 | 100.0% | 28.0% |
| 3838978 | 4333.1.1.3 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Type_ISP_C | 0.77 | 69.0 | 4.46e-01 | 100.0% | 28.6% |
| 346984 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.62 | 41.0 | 2.86e-01 | 91.8% | 19.9% |
| 3479213 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.55 | 48.0 | 4.51e-01 | 100.0% | 80.6% |
| 4392377 | 2011.2.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › tRNA_deacylase | 0.54 | 38.0 | 3.14e-01 | 75.3% | 98.8% |
| 3285365 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.54 | 44.0 | 2.93e-01 | 90.6% | 56.1% |
| 3724718 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.51 | 42.0 | 2.94e-01 | 92.9% | 52.1% |
| 3485170 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 44.0 | 2.77e-01 | 98.8% | 95.9% |