←Back to structures
IMGVR_UViG_3300009646_000255-3300009646-Ga0116132_10013131
Arc-VirIMGVR_UViG_3300009646_000255-3300009646-Ga0116132_10013131
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-54
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.79 | 65.0 | 6.10e-01 | 100.0% | 73.7% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.60 | 40.0 | 3.12e-01 | 100.0% | 30.2% |
| 1qmgB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 3.28e-01 | 100.0% | 94.4% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 36.0 | 2.95e-01 | 76.1% | 31.9% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 37.0 | 2.70e-01 | 76.1% | 45.9% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 36.0 | 2.65e-01 | 73.9% | 26.0% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.53 | 38.0 | 3.85e-01 | 100.0% | 97.7% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.33e-01 | 100.0% | 58.8% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.52 | 43.0 | 3.59e-01 | 100.0% | 84.4% |
| 3vwoA02 | 2.10.70.40 | Mainly Beta › Ribbon › Complement Module; domain 1 › peptidoglycan hydrolase | 0.51 | 33.0 | 3.25e-01 | 71.7% | 60.8% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973288 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.93 | 85.0 | 8.01e-01 | 100.0% | 83.6% |
| 4973203 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.89 | 81.0 | 7.91e-01 | 100.0% | 92.0% |
| 3984485 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.79 | 65.0 | 5.29e-01 | 100.0% | 51.2% |
| 4958959 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.78 | 59.0 | 6.02e-01 | 97.8% | 88.9% |
| 5001967 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.78 | 64.0 | 6.29e-01 | 100.0% | 84.0% |
| 3503896 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.77 | 63.0 | 6.36e-01 | 100.0% | 91.1% |
| 4993826 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.75 | 61.0 | 6.09e-01 | 100.0% | 85.4% |
| 5031362 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.73 | 56.0 | 5.12e-01 | 100.0% | 63.3% |
| 3588700 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.73 | 62.0 | 5.23e-01 | 100.0% | 56.2% |
| 5050062 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.72 | 55.0 | 5.05e-01 | 100.0% | 63.3% |
| 4993343 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.72 | 58.0 | 5.89e-01 | 100.0% | 91.1% |
| 4639978 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.72 | 55.0 | 5.19e-01 | 100.0% | 69.1% |
| 4955560 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.70 | 54.0 | 5.17e-01 | 100.0% | 70.9% |
| 5081177 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.70 | 54.0 | 5.50e-01 | 100.0% | 86.7% |
| 4992345 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.69 | 53.0 | 5.41e-01 | 100.0% | 86.7% |
| 4990060 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.69 | 52.0 | 5.30e-01 | 100.0% | 88.6% |
| 5079669 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 52.0 | 4.97e-01 | 100.0% | 70.9% |
| 4930879 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 55.0 | 5.38e-01 | 100.0% | 84.0% |
| 4967881 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 51.0 | 4.94e-01 | 100.0% | 72.2% |
| 5001623 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 53.0 | 5.25e-01 | 100.0% | 86.0% |
| 5027694 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 55.0 | 5.34e-01 | 100.0% | 85.2% |
| 4959387 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 53.0 | 5.37e-01 | 100.0% | 95.6% |
| 4934374 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 48.0 | 4.73e-01 | 100.0% | 76.0% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 52.0 | 4.99e-01 | 100.0% | 78.2% |
| 5027722 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 52.0 | 5.23e-01 | 100.0% | 95.6% |
| 4991158 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 49.0 | 5.00e-01 | 97.8% | 88.9% |
| 4992409 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 49.0 | 4.95e-01 | 100.0% | 93.3% |
| 5032176 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 49.0 | 4.66e-01 | 100.0% | 73.3% |
| 5065458 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 46.0 | 4.36e-01 | 100.0% | 66.7% |
| 4534384 | 1.1.3.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin | 0.61 | 49.0 | 4.80e-01 | 100.0% | 87.0% |
| 4991794 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 48.0 | 4.79e-01 | 100.0% | 86.0% |
| 3799822 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.61 | 36.0 | 3.77e-01 | 76.1% | 65.0% |
| 4966249 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.60 | 44.0 | 4.47e-01 | 100.0% | 86.7% |
| 3327381 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.60 | 42.0 | 2.29e-01 | 100.0% | 3.9% |
| 5074387 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.59 | 48.0 | 4.70e-01 | 100.0% | 83.0% |
| 3299745 | 207.1.1.185 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 | 0.59 | 41.0 | 2.42e-01 | 100.0% | 8.9% |
| 5076168 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.59 | 45.0 | 3.85e-01 | 100.0% | 49.4% |
| 3381794 | 207.1.1.57 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 | 0.58 | 42.0 | 2.24e-01 | 100.0% | 3.4% |
| 4934807 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.57 | 44.0 | 3.89e-01 | 100.0% | 56.0% |
| 3813009 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.57 | 46.0 | 2.78e-01 | 95.7% | 62.1% |
| 5030593 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.57 | 44.0 | 4.28e-01 | 100.0% | 76.4% |
| 5065699 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.57 | 43.0 | 4.35e-01 | 100.0% | 91.1% |
| 5060420 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.56 | 45.0 | 4.54e-01 | 100.0% | 97.8% |
| 3381391 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.56 | 39.0 | 2.38e-01 | 100.0% | 10.8% |
| 5027264 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.56 | 40.0 | 3.70e-01 | 100.0% | 55.7% |
| 3374952 | 375.4.1.5 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › RPA_interact_C | 0.56 | 44.0 | 3.75e-01 | 100.0% | 50.6% |
| 3373074 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.56 | 39.0 | 2.23e-01 | 100.0% | 6.0% |
| 3324101 | 207.1.1.47 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 | 0.55 | 39.0 | 2.30e-01 | 100.0% | 8.9% |
| 4024621 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.55 | 42.0 | 3.03e-01 | 91.3% | 95.7% |
| 4005331 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.55 | 41.0 | 4.10e-01 | 100.0% | 86.0% |
| 4967502 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.54 | 40.0 | 4.04e-01 | 100.0% | 88.9% |
| 4098695 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.54 | 39.0 | 2.52e-01 | 80.4% | 88.2% |
| 5059110 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.54 | 40.0 | 4.04e-01 | 100.0% | 95.6% |
| 4190768 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.54 | 36.0 | 2.30e-01 | 71.7% | 21.2% |
| 3782489 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 42.0 | 2.46e-01 | 95.7% | 19.2% |
| 3592430 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 36.0 | 2.21e-01 | 76.1% | 9.4% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.53 | 37.0 | 3.62e-01 | 100.0% | 67.3% |
| 5029188 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 37.0 | 3.65e-01 | 100.0% | 72.7% |
| 5059683 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 39.0 | 3.92e-01 | 100.0% | 84.0% |
| 5031928 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 36.0 | 3.59e-01 | 100.0% | 72.7% |
| 3377656 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.52 | 42.0 | 2.39e-01 | 100.0% | 8.2% |
| 5027484 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.51 | 37.0 | 3.81e-01 | 100.0% | 95.6% |
| 5079277 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.51 | 38.0 | 3.70e-01 | 100.0% | 72.4% |
| 3220364 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.51 | 36.0 | 2.56e-01 | 84.8% | 60.5% |
| 5012674 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.51 | 36.0 | 3.41e-01 | 100.0% | 58.6% |