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IMGVR_UViG_3300009647_000018-3300009647-Ga0123326_100122621
Arc-VirIMGVR_UViG_3300009647_000018-3300009647-Ga0123326_100122621
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-173
Domain cluster:
rep: SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00405__D49-178
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.74 | 68.0 | 6.18e-01 | 100.0% | 91.8% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 63.0 | 6.48e-01 | 100.0% | 96.8% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.69 | 62.0 | 6.03e-01 | 96.2% | 95.1% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.68 | 61.0 | 5.30e-01 | 97.7% | 94.3% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 51.0 | 4.18e-01 | 80.8% | 65.2% |
| 7cu8E01 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.66 | 59.0 | 5.25e-01 | 97.7% | 99.5% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 43.0 | 3.98e-01 | 70.8% | 70.2% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 47.0 | 3.88e-01 | 83.8% | 99.2% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.60 | 38.0 | 3.75e-01 | 96.2% | 59.6% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 46.0 | 3.77e-01 | 83.1% | 96.7% |
| 7rlrA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 47.0 | 3.82e-01 | 86.9% | 100.0% |
| 5cxwA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 52.0 | 3.69e-01 | 96.9% | 83.8% |
| 6sulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 42.0 | 4.53e-01 | 83.8% | 93.5% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 46.0 | 4.12e-01 | 85.4% | 76.6% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 49.0 | 3.91e-01 | 96.9% | 95.9% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 37.0 | 4.04e-01 | 71.5% | 82.4% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 41.0 | 3.59e-01 | 79.2% | 57.1% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 34.0 | 3.87e-01 | 75.4% | 85.0% |
| 2qiyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.71e-01 | 71.5% | 76.9% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 32.0 | 3.44e-01 | 70.0% | 71.6% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 45.0 | 3.62e-01 | 100.0% | 100.0% |
| 2essA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 31.0 | 3.46e-01 | 86.2% | 78.8% |
| 3rqbA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.50 | 42.0 | 3.34e-01 | 89.2% | 95.8% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.50 | 36.0 | 3.59e-01 | 74.6% | 76.8% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.50 | 43.0 | 3.33e-01 | 96.2% | 87.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954283 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.80 | 75.0 | 7.10e-01 | 100.0% | 90.0% |
| 5030147 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.79 | 74.0 | 7.17e-01 | 100.0% | 97.9% |
| 3971583 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.79 | 72.0 | 7.05e-01 | 100.0% | 90.0% |
| 3973908 | 881.1.1.25 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 | 0.77 | 69.0 | 6.49e-01 | 95.4% | 99.4% |
| 3713198 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.77 | 72.0 | 6.73e-01 | 100.0% | 93.5% |
| 3599881 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.77 | 71.0 | 6.87e-01 | 100.0% | 100.0% |
| 2559741 | 881.1.1.3 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › FAP | 0.75 | 70.0 | 6.40e-01 | 100.0% | 98.2% |
| 3285290 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.75 | 70.0 | 6.98e-01 | 100.0% | 100.0% |
| 3305789 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.75 | 68.0 | 6.36e-01 | 99.2% | 91.3% |
| 3679001 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.75 | 69.0 | 6.14e-01 | 100.0% | 98.3% |
| 4059480 | 881.1.1.37 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 | 0.74 | 68.0 | 6.15e-01 | 100.0% | 84.0% |
| 3281834 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.74 | 69.0 | 6.73e-01 | 99.2% | 99.3% |
| 1108141 | 881.1.1.12 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Tsi3 | 0.74 | 65.0 | 6.60e-01 | 100.0% | 95.2% |
| 3818565 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.74 | 69.0 | 6.45e-01 | 100.0% | 99.4% |
| 150440 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.74 | 68.0 | 6.24e-01 | 100.0% | 94.5% |
| 4951451 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.73 | 67.0 | 6.51e-01 | 99.2% | 98.6% |
| 3972141 | 881.1.1.25 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 | 0.72 | 66.0 | 6.21e-01 | 99.2% | 99.4% |
| 4229467 | 331.9.1.7 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP5B1_C | 0.72 | 41.0 | 4.38e-01 | 75.4% | 64.3% |
| 3287572 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.70 | 64.0 | 5.47e-01 | 96.2% | 92.3% |
| 5011833 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.69 | 53.0 | 5.87e-01 | 81.5% | 100.0% |
| 185719 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.68 | 61.0 | 5.30e-01 | 97.7% | 94.3% |
| 3959601 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.67 | 60.0 | 5.27e-01 | 97.7% | 96.8% |
| 3961987 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.67 | 60.0 | 5.21e-01 | 97.7% | 96.4% |
| 4957055 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.67 | 38.0 | 4.79e-01 | 77.7% | 97.3% |
| 3964085 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 58.0 | 5.86e-01 | 96.9% | 100.0% |
| 3291389 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 57.0 | 5.39e-01 | 97.7% | 93.5% |
| 4027513 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.63 | 39.0 | 4.11e-01 | 76.2% | 68.7% |
| 3230428 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.58 | 48.0 | 4.87e-01 | 87.7% | 91.5% |
| 3651121 | 331.3.1.31 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1990 | 0.58 | 47.0 | 3.99e-01 | 86.2% | 70.5% |
| 3799364 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.58 | 42.0 | 3.65e-01 | 74.6% | 94.2% |
| 5012521 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.58 | 50.0 | 4.18e-01 | 96.9% | 89.8% |
| 5042777 | 223.7.1.0 ↗ | a+b three layers › Profilin-like › FLJ32549 C-terminal domain-like › FLJ32549 C-terminal domain-like | 0.57 | 47.0 | 4.94e-01 | 97.7% | 100.0% |
| 3884373 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.57 | 50.0 | 4.94e-01 | 96.9% | 96.4% |
| 3250629 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.56 | 40.0 | 4.41e-01 | 86.9% | 92.4% |
| 4030396 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 42.0 | 4.21e-01 | 96.9% | 80.8% |
| 3216639 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 45.0 | 3.81e-01 | 90.8% | 77.3% |
| 3240258 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.54 | 37.0 | 3.85e-01 | 72.3% | 75.8% |
| 5033737 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.51 | 44.0 | 3.98e-01 | 96.9% | 84.0% |
| 3758249 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 43.0 | 4.20e-01 | 93.1% | 91.7% |
| 4677412 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 43.0 | 3.21e-01 | 90.8% | 87.4% |