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IMGVR_UViG_3300009648_000283-3300009648-Ga0116175_1000016178
Arc-VirIMGVR_UViG_3300009648_000283-3300009648-Ga0116175_1000016178
Identity
- Kingdom:
- archaea
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 101-163
Domain cluster:
rep: IMGVR_UViG_3300002733_000190-3300002733-codie8draft_100568114__D92-150
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.84 | 60.0 | 5.00e-01 | 95.2% | 45.6% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 51.0 | 5.89e-01 | 100.0% | 88.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.80 | 57.0 | 4.96e-01 | 95.2% | 50.0% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.80 | 56.0 | 5.75e-01 | 92.1% | 76.7% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.80 | 55.0 | 5.60e-01 | 90.5% | 73.0% |
| 7vw6B01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.77 | 53.0 | 5.24e-01 | 87.3% | 67.2% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 51.0 | 5.42e-01 | 100.0% | 78.2% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 57.0 | 5.69e-01 | 100.0% | 77.3% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 48.0 | 5.53e-01 | 92.1% | 97.6% |
| 2cqqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 53.0 | 5.21e-01 | 96.8% | 70.1% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 50.0 | 5.62e-01 | 92.1% | 93.6% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 57.0 | 5.34e-01 | 100.0% | 67.9% |
| 1eblA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.71 | 53.0 | 4.08e-01 | 95.2% | 34.7% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 48.0 | 4.62e-01 | 92.1% | 62.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 49.0 | 5.05e-01 | 90.5% | 80.0% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 48.0 | 5.35e-01 | 100.0% | 97.9% |
| 5by7A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.69 | 52.0 | 4.00e-01 | 95.2% | 34.9% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 46.0 | 5.12e-01 | 87.3% | 93.6% |
| 2a7oA00 | 1.10.1740.100 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain | 0.68 | 49.0 | 4.25e-01 | 77.8% | 49.0% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 44.0 | 4.58e-01 | 100.0% | 75.0% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 4.93e-01 | 93.7% | 72.4% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.65 | 58.0 | 5.00e-01 | 100.0% | 78.4% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 49.0 | 4.84e-01 | 96.8% | 77.9% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.64 | 41.0 | 4.54e-01 | 87.3% | 97.6% |
| 1xwyA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 47.0 | 3.04e-01 | 77.8% | 31.5% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 56.0 | 4.39e-01 | 100.0% | 75.9% |
| 3fhnA04 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.63 | 51.0 | 3.99e-01 | 87.3% | 90.1% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 47.0 | 4.36e-01 | 95.2% | 63.0% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 44.0 | 4.36e-01 | 95.2% | 72.1% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 48.0 | 4.09e-01 | 100.0% | 51.5% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 46.0 | 4.19e-01 | 79.4% | 79.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.61 | 52.0 | 4.81e-01 | 92.1% | 82.3% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 42.0 | 4.17e-01 | 100.0% | 68.7% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 46.0 | 3.30e-01 | 82.5% | 73.5% |
| 2lquA01 | 1.20.1420.40 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Decorin-binding protein | 0.60 | 51.0 | 3.87e-01 | 96.8% | 63.6% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.60 | 51.0 | 3.80e-01 | 96.8% | 48.5% |
| 3ic9A02 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.59 | 45.0 | 4.34e-01 | 81.0% | 82.9% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.59 | 45.0 | 3.94e-01 | 84.1% | 54.2% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 48.0 | 3.84e-01 | 87.3% | 53.8% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.59 | 43.0 | 4.06e-01 | 90.5% | 65.8% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 44.0 | 3.83e-01 | 82.5% | 53.6% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 49.0 | 3.95e-01 | 93.7% | 80.0% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 3.58e-01 | 87.3% | 90.3% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.57 | 47.0 | 4.49e-01 | 93.7% | 78.1% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 48.0 | 3.57e-01 | 93.7% | 37.4% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 51.0 | 4.27e-01 | 100.0% | 82.2% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 51.0 | 4.30e-01 | 100.0% | 88.2% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.56 | 45.0 | 3.12e-01 | 87.3% | 26.7% |
| 4agsA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 48.0 | 3.83e-01 | 100.0% | 81.5% |
| 1tuoA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.56 | 40.0 | 3.36e-01 | 77.8% | 87.2% |
| 2ncoA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 46.0 | 4.01e-01 | 96.8% | 76.5% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 4.24e-01 | 100.0% | 92.5% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 44.0 | 4.14e-01 | 93.7% | 70.9% |
| 5iduC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 48.0 | 3.55e-01 | 96.8% | 47.2% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 48.0 | 3.76e-01 | 100.0% | 66.9% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 43.0 | 4.31e-01 | 88.9% | 89.4% |
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 41.0 | 4.03e-01 | 82.5% | 86.6% |
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 40.0 | 3.89e-01 | 82.5% | 89.9% |
| 3uxgA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.52 | 36.0 | 2.79e-01 | 85.7% | 28.8% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 46.0 | 3.56e-01 | 98.4% | 92.8% |
| 2rfmB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.52 | 37.0 | 2.73e-01 | 82.5% | 26.1% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 47.0 | 3.86e-01 | 100.0% | 78.2% |
| 7kb2B01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.50 | 36.0 | 2.77e-01 | 90.5% | 28.8% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 54.0 | 5.56e-01 | 96.8% | 78.3% |
| 4553470 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.69 | 59.0 | 5.20e-01 | 96.8% | 65.6% |
| 4992012 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 54.0 | 5.50e-01 | 100.0% | 91.7% |
| 3489661 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.68 | 59.0 | 4.10e-01 | 100.0% | 29.8% |
| 3388667 | 101.1.2.477 ↗ | alpha arrays › HTH › HTH › winged helix domain › MADF_DNA_bdg | 0.68 | 57.0 | 5.02e-01 | 98.4% | 63.2% |
| 3415948 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.67 | 57.0 | 5.05e-01 | 100.0% | 64.2% |
| 3190527 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 59.0 | 5.08e-01 | 98.4% | 77.0% |
| 3961315 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 57.0 | 5.53e-01 | 100.0% | 85.7% |
| 3398009 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.67 | 53.0 | 4.74e-01 | 87.3% | 67.8% |
| 3397098 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.66 | 55.0 | 4.92e-01 | 92.1% | 64.4% |
| 3388840 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.66 | 56.0 | 5.03e-01 | 100.0% | 67.8% |
| 3389382 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.66 | 54.0 | 4.85e-01 | 95.2% | 64.4% |
| 3432597 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 52.0 | 4.37e-01 | 95.2% | 51.4% |
| 3623273 | 101.1.2.712 ↗ | alpha arrays › HTH › HTH › winged helix domain › FNIP_C | 0.66 | 57.0 | 3.72e-01 | 100.0% | 22.5% |
| 3222238 | 101.1.2.649 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28730 | 0.66 | 53.0 | 5.11e-01 | 87.3% | 78.6% |
| 3905142 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.65 | 52.0 | 5.51e-01 | 87.3% | 100.0% |
| 3311957 | 1097.1.1.2 ↗ | alpha bundles › C-terminal subgroup One Signature (COS) domain › C-terminal subgroup One Signature (COS) domain › C-terminal subgroup One Signature (COS) domain › PF30904 | 0.65 | 49.0 | 4.88e-01 | 81.0% | 84.6% |
| 3402081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 55.0 | 4.96e-01 | 96.8% | 67.8% |
| 3476023 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.65 | 48.0 | 4.22e-01 | 79.4% | 52.6% |
| 5045518 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.65 | 58.0 | 3.89e-01 | 98.4% | 67.7% |
| 3390891 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.65 | 52.0 | 4.72e-01 | 95.2% | 64.4% |
| 4964045 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.65 | 47.0 | 4.27e-01 | 82.5% | 57.6% |
| 3721066 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.64 | 55.0 | 3.75e-01 | 100.0% | 46.8% |
| 3622217 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.64 | 54.0 | 4.34e-01 | 93.7% | 47.2% |
| 5013299 | 148.1.3.407 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF2391 | 0.64 | 48.0 | 3.96e-01 | 81.0% | 49.6% |
| 3575981 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.64 | 54.0 | 5.06e-01 | 95.2% | 95.0% |
| 4937584 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.64 | 49.0 | 4.62e-01 | 82.5% | 70.7% |
| 3887051 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.63 | 52.0 | 4.70e-01 | 100.0% | 66.7% |
| 3873685 | 601.24.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 0.63 | 55.0 | 4.44e-01 | 100.0% | 93.6% |
| 3331225 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.62 | 47.0 | 4.58e-01 | 81.0% | 72.9% |
| 3404621 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.62 | 50.0 | 4.56e-01 | 96.8% | 65.6% |
| 3688425 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.62 | 48.0 | 3.70e-01 | 84.1% | 38.6% |
| 3858480 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.61 | 49.0 | 4.74e-01 | 90.5% | 78.6% |
| 4940274 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 52.0 | 4.34e-01 | 96.8% | 56.4% |
| 3954906 | 378.1.1.23 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 | 0.60 | 51.0 | 3.91e-01 | 96.8% | 39.4% |
| 3795237 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.60 | 53.0 | 4.33e-01 | 98.4% | 58.3% |
| 3264876 | 604.12.1.42 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF202 | 0.60 | 54.0 | 4.60e-01 | 100.0% | 82.0% |
| 4976593 | 2005.1.1.12 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1e | 0.60 | 44.0 | 3.26e-01 | 77.8% | 45.6% |
| 3518519 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.60 | 47.0 | 4.87e-01 | 87.3% | 91.7% |
| 3938334 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.59 | 47.0 | 4.59e-01 | 87.3% | 78.6% |
| 4487944 | 605.1.1.131 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Val_tRNA-synt_C | 0.59 | 50.0 | 4.98e-01 | 92.1% | 89.2% |
| 3933897 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.58 | 51.0 | 4.36e-01 | 100.0% | 77.1% |
| 4420750 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.58 | 49.0 | 4.79e-01 | 92.1% | 87.1% |
| 3935894 | 101.1.2.200 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_65 | 0.58 | 51.0 | 4.47e-01 | 100.0% | 85.3% |
| 5049548 | 4958.1.1.4 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.58 | 48.0 | 3.32e-01 | 95.2% | 63.5% |
| 3486029 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.58 | 44.0 | 3.03e-01 | 85.7% | 44.4% |
| 3628026 | 101.1.2.200 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_65 | 0.57 | 49.0 | 4.33e-01 | 100.0% | 88.4% |
| 3269226 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 49.0 | 4.64e-01 | 100.0% | 84.0% |
| 3813837 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.56 | 45.0 | 4.25e-01 | 93.7% | 74.7% |
| 1248123 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.55 | 41.0 | 3.17e-01 | 81.0% | 52.0% |
| 4227260 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 47.0 | 3.86e-01 | 98.4% | 80.8% |
| None | — | 0.55 | 49.0 | 3.04e-01 | 100.0% | 53.8% | |
| 5070768 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.54 | 45.0 | 3.30e-01 | 98.4% | 33.5% |
| 4000710 | 1106.1.1.1 ↗ | alpha arrays › RDS3 complex subunit 10 › RDS3 complex subunit 10 › RDS3 complex subunit 10 › SF3b10 | 0.52 | 42.0 | 3.81e-01 | 88.9% | 68.2% |
| 3415514 | 132.1.1.2 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › Ribosomal_L50 | 0.51 | 41.0 | 3.66e-01 | 96.8% | 63.1% |
D2
medium
residues 43-98
Domain cluster:
representative