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IMGVR_UViG_3300009657_000547-3300009657-Ga0116179_100364511

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300009657_000547-3300009657-Ga0116179_100364511 ↗
Kingdom:: archaea

Quality

78.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-56

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5fmnA00	1.20.58.1000	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer	0.87	79.0	6.61e-01	100.0%	60.5%
4k08A00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.85	72.0	5.18e-01	98.1%	34.0%
4h63H01	1.20.58.1710	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.82	70.0	6.36e-01	98.1%	73.6%
1w99A01	1.20.190.10	Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain	0.80	73.0	4.93e-01	100.0%	35.8%
6ynwH01	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.78	69.0	6.17e-01	100.0%	81.1%
1skvA00	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.78	61.0	5.63e-01	84.6%	67.2%
1lrzA03	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.78	60.0	5.64e-01	82.7%	69.4%
1w53A00	1.10.1240.30	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain	0.74	49.0	4.18e-01	71.2%	42.9%
5ux1D00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.73	60.0	3.98e-01	88.5%	25.4%
1br0A00	1.20.58.70	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.72	62.0	4.80e-01	100.0%	43.3%
2mtqA00	1.20.58.130	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.68	48.0	4.34e-01	80.8%	54.8%
2b7mA00	1.20.1280.170	Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70	0.67	61.0	3.43e-01	100.0%	18.3%
5lb3B02	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.65	53.0	3.50e-01	90.4%	71.9%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3491418	192.8.1.0 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain	0.81	75.0	6.50e-01	100.0%	77.3%
4674	192.7.1.1 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB	0.78	61.0	5.67e-01	84.6%	67.7%
2390153	109.4.1.1483 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_M, HAT_Syf1_CNRKL1_C	0.76	50.0	2.80e-01	75.0%	5.8%
4329615	605.1.1.1 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA	0.75	64.0	5.86e-01	96.2%	71.4%
3266213	904.1.1.0 ↗	few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain	0.74	66.0	6.00e-01	100.0%	81.4%
3849639	192.1.1.38 ↗	alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF4527	0.73	61.0	5.83e-01	92.3%	81.7%
3785340	7581.1.1.3 ↗	a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt,Ketoacyl-synt_C	0.72	59.0	3.29e-01	96.2%	8.7%
5050887	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.71	58.0	4.17e-01	96.2%	31.0%