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IMGVR_UViG_3300009657_000564-3300009657-Ga0116179_10109793
Arc-VirIMGVR_UViG_3300009657_000564-3300009657-Ga0116179_10109793
Identity
- Kingdom:
- archaea
Quality
73.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-115
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 50.0 | 5.71e-01 | 90.5% | 98.1% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 48.0 | 5.22e-01 | 94.6% | 85.5% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 43.0 | 4.53e-01 | 89.2% | 76.9% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 4.55e-01 | 89.2% | 79.4% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.42e-01 | 93.2% | 71.1% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 41.0 | 4.28e-01 | 90.5% | 81.5% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 40.0 | 3.67e-01 | 73.0% | 53.1% |
| 4rljB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 43.0 | 3.38e-01 | 78.4% | 88.4% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 52.0 | 4.26e-01 | 100.0% | 67.7% |
| 1jg1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 40.0 | 2.95e-01 | 89.2% | 26.5% |
| 1wbaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 45.0 | 3.54e-01 | 91.9% | 91.2% |
| 5bpxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 46.0 | 3.69e-01 | 93.2% | 83.7% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 38.0 | 3.12e-01 | 70.3% | 56.1% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.83e-01 | 100.0% | 91.5% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.90e-01 | 100.0% | 86.1% |
| 3vrdB03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.55 | 39.0 | 3.94e-01 | 77.0% | 93.2% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.54 | 34.0 | 3.91e-01 | 77.0% | 92.2% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 46.0 | 3.79e-01 | 100.0% | 94.6% |
| 4oddA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.69e-01 | 97.3% | 95.3% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 46.0 | 3.78e-01 | 98.6% | 96.5% |
| 5o46A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.72e-01 | 86.5% | 74.6% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.68e-01 | 86.5% | 17.8% |
| 1orvA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.54 | 41.0 | 2.58e-01 | 86.5% | 20.6% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 38.0 | 3.12e-01 | 75.7% | 91.5% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.53 | 38.0 | 3.89e-01 | 77.0% | 88.7% |
| 2o1qA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 3.66e-01 | 91.9% | 99.2% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 41.0 | 3.39e-01 | 86.5% | 51.7% |
| 3q9oA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.28e-01 | 100.0% | 75.0% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 45.0 | 3.50e-01 | 100.0% | 84.3% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.52 | 40.0 | 3.44e-01 | 85.1% | 78.9% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 34.0 | 3.68e-01 | 90.5% | 82.3% |
| 1avwB00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 38.0 | 3.04e-01 | 83.8% | 58.5% |
| 6bm0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 2.81e-01 | 98.6% | 97.1% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 39.0 | 3.58e-01 | 86.5% | 100.0% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 2.88e-01 | 81.1% | 78.4% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147812 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.76 | 65.0 | 6.07e-01 | 93.2% | 81.1% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.74 | 58.0 | 5.53e-01 | 100.0% | 71.8% |
| 3819397 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.73 | 59.0 | 5.76e-01 | 100.0% | 80.0% |
| 3807651 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.71 | 63.0 | 5.54e-01 | 98.6% | 82.7% |
| 3917376 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.67 | 52.0 | 5.30e-01 | 90.5% | 88.6% |
| 4984882 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 49.0 | 5.10e-01 | 94.6% | 84.3% |
| 3173378 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.65 | 39.0 | 2.72e-01 | 82.4% | 18.4% |
| 3396951 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.64 | 57.0 | 3.56e-01 | 100.0% | 24.5% |
| 3833012 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.63 | 50.0 | 4.82e-01 | 94.6% | 75.3% |
| 3825252 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 56.0 | 5.27e-01 | 100.0% | 82.2% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.62 | 52.0 | 5.22e-01 | 91.9% | 92.0% |
| 3339162 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.62 | 55.0 | 4.60e-01 | 100.0% | 73.1% |
| 3842363 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.61 | 50.0 | 4.39e-01 | 97.3% | 60.0% |
| 3287628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.71e-01 | 90.5% | 93.8% |
| 3259640 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.57 | 39.0 | 3.55e-01 | 71.6% | 97.0% |
| 4962493 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.56 | 42.0 | 3.90e-01 | 81.1% | 72.6% |
| 3625263 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 49.0 | 4.47e-01 | 98.6% | 94.0% |
| 1684916 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 47.0 | 3.83e-01 | 100.0% | 91.5% |
| 3229184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.45e-01 | 91.9% | 92.9% |
| 412674 | 9.1.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › His_binding | 0.55 | 46.0 | 3.85e-01 | 100.0% | 85.4% |
| 3939941 | 4.1.1.235 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 | 0.54 | 48.0 | 3.99e-01 | 98.6% | 93.1% |
| 3310438 | 5.1.4.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TAF1C_beta-prop | 0.54 | 45.0 | 2.82e-01 | 98.6% | 86.7% |
| 1155745 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 45.0 | 3.61e-01 | 98.6% | 84.9% |
| 3519971 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.52 | 43.0 | 3.39e-01 | 95.9% | 55.4% |
| 3930705 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.52 | 38.0 | 3.48e-01 | 87.8% | 58.0% |
| 4115972 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 37.0 | 3.04e-01 | 75.7% | 82.1% |
| 4020042 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.52 | 43.0 | 3.01e-01 | 93.2% | 57.6% |
| 3496242 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.88e-01 | 78.4% | 100.0% |
| 3257650 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 46.0 | 4.40e-01 | 100.0% | 88.2% |
| 3192949 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.51 | 41.0 | 2.75e-01 | 91.9% | 45.4% |
| 3260045 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 38.0 | 3.84e-01 | 81.1% | 81.3% |
| 3194179 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.50 | 43.0 | 2.96e-01 | 95.9% | 54.9% |
| 4227879 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.50 | 41.0 | 2.54e-01 | 94.6% | 68.3% |
| 3376947 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 40.0 | 2.73e-01 | 91.9% | 26.7% |
| 3670829 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.50 | 39.0 | 2.59e-01 | 86.5% | 19.4% |