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IMGVR_UViG_3300009659_000224-3300009659-Ga0123328_100411914
Arc-VirIMGVR_UViG_3300009659_000224-3300009659-Ga0123328_100411914
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-176
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00499__D174-378
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g10A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 36.0 | 3.96e-01 | 74.4% | 72.8% |
| 6cy5A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.59 | 27.0 | 3.63e-01 | 90.7% | 82.0% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.58 | 32.0 | 3.86e-01 | 76.2% | 83.8% |
| 6dewA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 40.0 | 3.92e-01 | 79.1% | 83.2% |
| 1gu9C00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.51 | 37.0 | 3.83e-01 | 94.2% | 76.8% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 36.0 | 3.87e-01 | 94.8% | 88.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3904740 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.86 | 76.0 | 7.63e-01 | 95.9% | 89.7% |
| 4049068 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.83 | 77.0 | 7.06e-01 | 96.5% | 86.0% |
| 4442740 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 77.0 | 7.03e-01 | 97.1% | 88.8% |
| 3274429 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 77.0 | 6.98e-01 | 96.5% | 81.9% |
| 4571181 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 75.0 | 7.29e-01 | 94.8% | 97.3% |
| 3600675 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.81 | 75.0 | 6.87e-01 | 96.5% | 85.1% |
| 2589766 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.80 | 75.0 | 6.60e-01 | 96.5% | 77.4% |
| 5067204 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.77 | 72.0 | 6.92e-01 | 96.5% | 93.7% |
| 4459458 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.74 | 69.0 | 6.63e-01 | 98.8% | 92.8% |
| 5063438 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.73 | 68.0 | 6.74e-01 | 98.8% | 93.3% |
| 3840735 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 36.0 | 3.75e-01 | 76.7% | 61.9% |
| 4490049 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.57 | 27.0 | 3.50e-01 | 72.7% | 80.0% |
| 5024032 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.55 | 36.0 | 3.74e-01 | 100.0% | 70.6% |
| 3394920 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 39.0 | 3.64e-01 | 76.7% | 68.0% |
| 3394944 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.51 | 44.0 | 3.80e-01 | 97.7% | 58.5% |
| 4420728 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.51 | 39.0 | 3.40e-01 | 80.8% | 80.0% |