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IMGVR_UViG_3300009669_000679-3300009669-Ga0116148_101359210
Arc-VirIMGVR_UViG_3300009669_000679-3300009669-Ga0116148_101359210
Identity
- Kingdom:
- archaea
Quality
69.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-103
D2
high
residues 117-226
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_0-10091_curated_closed_complete_start-adj_prodigal-single.1__X__X__00047__D194-294
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.68 | 35.0 | 4.39e-01 | 76.4% | 81.8% |
| 1z85A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.59 | 32.0 | 3.90e-01 | 76.4% | 83.6% |
| 1nxzA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.58 | 33.0 | 4.01e-01 | 78.2% | 86.1% |
| 1m4wA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.55 | 43.0 | 3.67e-01 | 87.3% | 68.0% |
| 3op6A00 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.54 | 40.0 | 3.62e-01 | 77.3% | 74.0% |
| 1vjfA00 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.53 | 39.0 | 3.41e-01 | 76.4% | 93.4% |
| 1ii2A03 | 3.90.228.20 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.53 | 34.0 | 2.65e-01 | 76.4% | 28.1% |
| 1wdvA00 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.53 | 40.0 | 3.59e-01 | 78.2% | 97.3% |
| 2etnA02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.52 | 33.0 | 4.03e-01 | 77.3% | 98.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3223922 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.60 | 42.0 | 4.31e-01 | 72.7% | 88.6% |
| 3899239 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.57 | 40.0 | 4.33e-01 | 73.6% | 88.9% |
| 4138417 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.56 | 39.0 | 4.49e-01 | 81.8% | 97.5% |
| 4079831 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.55 | 39.0 | 4.36e-01 | 83.6% | 94.1% |
| 4239904 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.54 | 38.0 | 4.28e-01 | 82.7% | 92.9% |
| 3386644 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.54 | 37.0 | 4.23e-01 | 82.7% | 91.8% |
| 4259229 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.54 | 35.0 | 4.27e-01 | 79.1% | 100.0% |
| 4409183 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.54 | 36.0 | 4.07e-01 | 80.0% | 89.3% |
| 4084680 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.53 | 37.0 | 4.17e-01 | 82.7% | 91.8% |
| 4544250 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.53 | 37.0 | 4.15e-01 | 81.8% | 92.9% |
| 3354546 | 299.1.1.1 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit | 0.53 | 39.0 | 3.45e-01 | 77.3% | 98.8% |
| 3596271 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 33.0 | 3.43e-01 | 85.5% | 67.0% |
| 4096819 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.53 | 37.0 | 4.18e-01 | 82.7% | 94.1% |
| 3220969 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.52 | 36.0 | 3.93e-01 | 76.4% | 90.0% |
| 3851268 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.51 | 35.0 | 3.77e-01 | 74.5% | 84.2% |
| 4008146 | 223.1.1.70 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAPES1 | 0.50 | 42.0 | 3.21e-01 | 92.7% | 45.6% |