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IMGVR_UViG_3300009669_000944-3300009669-Ga0116148_10071258
Arc-VirIMGVR_UViG_3300009669_000944-3300009669-Ga0116148_10071258
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-106
Domain cluster:
representative
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034876 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 81.0 | 4.87e-01 | 100.0% | 19.8% |
| 4075436 | 2002.1.1.124 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,LAM_C | 0.85 | 79.0 | 4.85e-01 | 100.0% | 20.7% |
| 4959771 | 2002.1.1.450 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › LAM_C | 0.83 | 77.0 | 4.71e-01 | 100.0% | 20.5% |
| 4145449 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.82 | 61.0 | 3.92e-01 | 78.2% | 20.6% |
| 3398087 | 4310.1.1.1 ↗ | alpha arrays › Dcp2 box A domain › Dcp2 box A domain › Dcp2 box A domain › DCP2 | 0.50 | 37.0 | 3.49e-01 | 78.2% | 74.7% |
D2
high
residues 124-361
Domain cluster:
rep: IMGVR_UViG_3300025737_000881-3300025737-Ga0208694_10168571__D3-196
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04055.28 best | Radical_SAM | 46.4 | 6.90e-12 | 65.1% | 93.4% |
| PF12544.14 | LAM_C | 42.1 | 1.30e-10 | 11.8% | 22.1% |