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IMGVR_UViG_3300009673_000692-3300009673-Ga0116185_10150363
Arc-VirIMGVR_UViG_3300009673_000692-3300009673-Ga0116185_10150363
Identity
- Kingdom:
- archaea
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-21_53-110
Domain cluster:
representative
D2
medium
residues 225-283
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w63A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 56.0 | 3.26e-01 | 100.0% | 11.4% |
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.59 | 46.0 | 4.48e-01 | 89.8% | 88.2% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 3.37e-01 | 94.9% | 62.1% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.53 | 43.0 | 3.94e-01 | 94.9% | 91.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4449499 | 3455.1.1.1 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › RXLR | 0.62 | 44.0 | 4.32e-01 | 78.0% | 84.6% |
| 4996436 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.59 | 46.0 | 3.20e-01 | 89.8% | 52.9% |
| 4357827 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.58 | 42.0 | 4.04e-01 | 78.0% | 79.7% |
| 3436848 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 44.0 | 2.70e-01 | 100.0% | 12.9% |
| 3504389 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 36.0 | 3.40e-01 | 79.7% | 83.7% |
| 3407508 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.51 | 37.0 | 3.87e-01 | 78.0% | 90.9% |
D3
medium
residues 284-353
Domain cluster:
rep: IMGVR_UViG_3300010365_002085-3300010365-Ga0116251_100223456__D4-54
D4
medium
residues 354-413
Domain cluster:
rep: IMGVR_UViG_3300010365_002085-3300010365-Ga0116251_100223456__D55-115