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IMGVR_UViG_3300009674_000354-3300009674-Ga0116173_10132535
Arc-VirIMGVR_UViG_3300009674_000354-3300009674-Ga0116173_10132535
Identity
- Kingdom:
- archaea
Quality
61.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-44
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq8300 | 3.10.450.80 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 60.0 | 4.61e-01 | 92.3% | 81.5% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.66 | 51.0 | 5.03e-01 | 94.9% | 97.7% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.65 | 54.0 | 5.05e-01 | 100.0% | 98.1% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.63 | 45.0 | 4.68e-01 | 89.7% | 88.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.62 | 45.0 | 4.31e-01 | 84.6% | 89.6% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.61 | 46.0 | 4.10e-01 | 87.2% | 54.8% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.61 | 47.0 | 4.38e-01 | 94.9% | 91.1% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 46.0 | 4.14e-01 | 89.7% | 58.1% |
| 2kxqA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 40.0 | 4.22e-01 | 89.7% | 93.3% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.60 | 43.0 | 3.69e-01 | 87.2% | 43.1% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 49.0 | 4.71e-01 | 100.0% | 95.7% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 43.0 | 3.83e-01 | 84.6% | 61.9% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 3.97e-01 | 100.0% | 80.0% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.38e-01 | 97.4% | 87.0% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 42.0 | 4.36e-01 | 89.7% | 91.4% |
| 2it1A02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 47.0 | 4.08e-01 | 94.9% | 88.9% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 43.0 | 3.46e-01 | 92.3% | 67.4% |
| 2poiA00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.56 | 46.0 | 3.75e-01 | 97.4% | 67.9% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 43.0 | 3.45e-01 | 89.7% | 38.6% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 40.0 | 4.07e-01 | 100.0% | 79.5% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 41.0 | 2.86e-01 | 97.4% | 37.6% |
| 2w5qA01 | 3.30.1120.170 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 41.0 | 3.12e-01 | 94.9% | 36.6% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.53 | 40.0 | 3.71e-01 | 100.0% | 80.0% |
| 2cjgA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 2.83e-01 | 94.9% | 66.9% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3938524 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 68.0 | 6.89e-01 | 94.9% | 97.4% |
| 3400851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 61.0 | 5.85e-01 | 89.7% | 73.3% |
| 3389366 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 61.0 | 6.18e-01 | 89.7% | 89.7% |
| 3398775 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.77 | 61.0 | 6.13e-01 | 92.3% | 100.0% |
| 3413714 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.76 | 62.0 | 3.84e-01 | 89.7% | 47.3% |
| 4279883 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.75 | 60.0 | 5.83e-01 | 89.7% | 100.0% |
| 3585646 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 58.0 | 5.85e-01 | 89.7% | 87.5% |
| 4026161 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.75 | 62.0 | 4.36e-01 | 92.3% | 78.4% |
| 4072840 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.74 | 59.0 | 5.70e-01 | 89.7% | 100.0% |
| 3484214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 3.97e-01 | 92.3% | 60.7% |
| 4025577 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.73 | 61.0 | 3.96e-01 | 97.4% | 57.3% |
| 2774420 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.72 | 58.0 | 3.75e-01 | 92.3% | 55.3% |
| 4928216 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.71 | 53.0 | 5.41e-01 | 84.6% | 100.0% |
| 5074404 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.71 | 59.0 | 5.43e-01 | 100.0% | 100.0% |
| 4946465 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.71 | 58.0 | 5.41e-01 | 94.9% | 100.0% |
| 4927454 | 386.1.1.418 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FPG_IleRS | 0.70 | 56.0 | 5.40e-01 | 89.7% | 93.3% |
| 4928533 | 375.1.4.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI | 0.69 | 57.0 | 4.03e-01 | 100.0% | 37.0% |
| 4518501 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.69 | 55.0 | 5.37e-01 | 94.9% | 82.2% |
| 4981763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 53.0 | 5.27e-01 | 87.2% | 90.0% |
| 3419233 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 51.0 | 5.25e-01 | 89.7% | 100.0% |
| 4488182 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 48.0 | 4.82e-01 | 87.2% | 92.5% |
| 4397965 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 48.0 | 3.41e-01 | 92.3% | 23.6% |
| 3833030 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.64 | 52.0 | 3.72e-01 | 100.0% | 30.4% |
| 3581696 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 51.0 | 4.85e-01 | 97.4% | 84.0% |
| 3285549 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.63 | 50.0 | 3.22e-01 | 94.9% | 83.5% |
| 3407849 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 49.0 | 4.05e-01 | 100.0% | 48.2% |
| 4973687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 50.0 | 5.03e-01 | 94.9% | 92.5% |
| 3173243 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.62 | 47.0 | 3.85e-01 | 87.2% | 43.8% |
| 3701625 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.61 | 46.0 | 4.51e-01 | 84.6% | 75.6% |
| 3667651 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 48.0 | 3.88e-01 | 97.4% | 91.1% |
| 3925225 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 45.0 | 4.59e-01 | 87.2% | 97.1% |
| 4967209 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 44.0 | 3.65e-01 | 94.9% | 88.9% |
| 3784201 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.59 | 45.0 | 3.51e-01 | 89.7% | 35.0% |
| 3164762 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 47.0 | 4.68e-01 | 89.7% | 87.5% |
| 3936917 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.58 | 43.0 | 4.45e-01 | 87.2% | 97.1% |
| 5078464 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 44.0 | 4.36e-01 | 97.4% | 97.8% |
| 5024226 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.56 | 42.0 | 4.11e-01 | 84.6% | 73.3% |
| 3341478 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 42.0 | 4.20e-01 | 97.4% | 80.0% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 39.0 | 3.99e-01 | 89.7% | 97.4% |
| 3512963 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 40.0 | 2.40e-01 | 89.7% | 18.2% |
| 3584345 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.55 | 39.0 | 2.92e-01 | 87.2% | 32.6% |
| 3974846 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.55 | 44.0 | 3.39e-01 | 100.0% | 40.9% |
| 5059205 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 40.0 | 4.03e-01 | 87.2% | 87.5% |
| 3563732 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.54 | 47.0 | 4.23e-01 | 100.0% | 80.0% |
| 5037381 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 38.0 | 3.73e-01 | 87.2% | 74.0% |
| 3209529 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.54 | 43.0 | 3.88e-01 | 97.4% | 71.7% |
| 3230560 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 39.0 | 3.98e-01 | 84.6% | 94.3% |
| 3874056 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.51 | 38.0 | 3.65e-01 | 100.0% | 76.4% |
| 3479395 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.51 | 35.0 | 3.60e-01 | 87.2% | 100.0% |
| 3674411 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.51 | 43.0 | 3.90e-01 | 97.4% | 78.2% |