IMGVR_UViG_3300009680_000356-3300009680-Ga0123335_10190511

Arc-Vir

Identity

77.8 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-66

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2jn6A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.64	43.0	4.04e-01	71.2%	56.5%
2om6A02	1.10.150.400	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.62	43.0	4.09e-01	72.7%	78.5%
6sdkA01	1.10.10.2830	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.61	44.0	3.87e-01	75.8%	69.1%
6s6hA01	1.10.10.2830	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.60	42.0	3.63e-01	75.8%	67.0%
2w7nA00	1.10.10.2690	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.58	44.0	3.89e-01	80.3%	77.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5027602	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.77	53.0	5.68e-01	71.2%	87.3%
4501735	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.77	61.0	5.82e-01	98.5%	73.3%
3949224	101.1.1.18 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_8	0.75	56.0	5.49e-01	78.8%	74.3%
5004840	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.73	54.0	5.07e-01	78.8%	76.2%
3286659	101.1.3.1 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE	0.70	48.0	4.78e-01	71.2%	67.1%
4032673	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.57	47.0	3.25e-01	93.9%	36.7%

D2 medium residues 78-117

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2r0qC02	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.82	68.0	6.23e-01	100.0%	89.1%
1gdtB03	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.81	69.0	6.71e-01	100.0%	88.9%
4ijaA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.78	65.0	5.72e-01	100.0%	66.7%
2lvsA02	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.76	62.0	5.93e-01	100.0%	83.7%
4iv6B01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.67	45.0	3.24e-01	72.5%	24.1%
1vhxB00	3.30.420.140	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain	0.61	41.0	2.92e-01	72.5%	20.3%
2ib1A00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.57	43.0	3.45e-01	87.5%	46.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3922450	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.83	70.0	7.04e-01	100.0%	100.0%
3988145	101.1.6.0 ↗	alpha arrays › HTH › HTH › TrpR	0.82	69.0	6.51e-01	100.0%	80.0%

D3 medium residues 128-171

PDB

Domain cluster: representative