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IMGVR_UViG_3300009680_000868-3300009680-Ga0123335_10138953
Arc-VirIMGVR_UViG_3300009680_000868-3300009680-Ga0123335_10138953
Identity
- Kingdom:
- archaea
Quality
76.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-89
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08220.19 best | HTH_DeoR | 26.3 | 6.80e-06 | 58.0% | 77.2% |
| PF08279.19 | HTH_11 | 25.4 | 1.40e-05 | 55.7% | 74.6% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 57.0 | 6.27e-01 | 75.0% | 84.9% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 56.0 | 6.41e-01 | 71.6% | 91.0% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 54.0 | 5.99e-01 | 70.5% | 85.5% |
| 8amzP01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.81 | 63.0 | 4.01e-01 | 80.7% | 19.7% |
| 7l1iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 55.0 | 4.46e-01 | 70.5% | 45.8% |
| 8amzO01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.80 | 61.0 | 3.98e-01 | 79.5% | 20.9% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 51.0 | 5.26e-01 | 70.5% | 69.0% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 53.0 | 4.29e-01 | 70.5% | 41.7% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 57.0 | 4.68e-01 | 76.1% | 62.7% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 54.0 | 4.40e-01 | 71.6% | 46.4% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 53.0 | 5.45e-01 | 72.7% | 75.6% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 53.0 | 4.57e-01 | 71.6% | 53.8% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 55.0 | 4.72e-01 | 75.0% | 51.5% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 52.0 | 4.30e-01 | 70.5% | 46.4% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 4.61e-01 | 73.9% | 53.7% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 49.0 | 5.37e-01 | 70.5% | 81.7% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 53.0 | 4.36e-01 | 71.6% | 44.5% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 4.36e-01 | 70.5% | 49.3% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 55.0 | 6.02e-01 | 77.3% | 95.8% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 5.68e-01 | 72.7% | 91.5% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.04e-01 | 71.6% | 69.1% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 50.0 | 5.36e-01 | 70.5% | 81.6% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.58e-01 | 78.4% | 54.9% |
| 2pexA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 4.41e-01 | 73.9% | 52.2% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.26e-01 | 71.6% | 48.9% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 5.44e-01 | 73.9% | 94.3% |
| 2es9A00 | 1.20.1290.30 | Mainly Alpha › Up-down Bundle › AhpD-like › | 0.54 | 36.0 | 3.54e-01 | 70.5% | 74.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3988037 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.93 | 68.0 | 7.13e-01 | 79.5% | 82.5% |
| 4944342 | 101.1.2.899 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 | 0.92 | 71.0 | 6.64e-01 | 80.7% | 66.7% |
| 3491617 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.92 | 67.0 | 6.24e-01 | 77.3% | 62.9% |
| 4934191 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.92 | 66.0 | 5.54e-01 | 77.3% | 48.1% |
| 4996877 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 70.0 | 6.51e-01 | 79.5% | 66.7% |
| 5050345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 68.0 | 6.65e-01 | 79.5% | 72.6% |
| 4964369 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 62.0 | 6.06e-01 | 75.0% | 66.3% |
| 5046546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 68.0 | 4.84e-01 | 79.5% | 30.4% |
| 3992134 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.88 | 61.0 | 7.14e-01 | 72.7% | 96.9% |
| 4159655 | 101.1.2.530 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 | 0.88 | 55.0 | 6.16e-01 | 70.5% | 80.0% |
| 4973486 | 101.1.2.63 ↗ | alpha arrays › HTH › HTH › winged helix domain › FaeA | 0.88 | 64.0 | 6.11e-01 | 78.4% | 66.0% |
| 3609864 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.88 | 67.0 | 4.86e-01 | 80.7% | 31.8% |
| 4961117 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.88 | 67.0 | 6.41e-01 | 79.5% | 70.0% |
| 3363790 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.88 | 61.0 | 6.80e-01 | 72.7% | 90.0% |
| 3557944 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.87 | 61.0 | 6.60e-01 | 72.7% | 84.0% |
| 3185112 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.87 | 65.0 | 7.04e-01 | 79.5% | 90.7% |
| 5060150 | 101.1.2.222 ↗ | alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N | 0.87 | 55.0 | 5.66e-01 | 71.6% | 67.1% |
| 4973758 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.87 | 58.0 | 6.73e-01 | 76.1% | 93.8% |
| 3946871 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.87 | 60.0 | 6.75e-01 | 71.6% | 98.6% |
| 5003077 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.87 | 61.0 | 6.88e-01 | 75.0% | 91.4% |
| 5038636 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.87 | 63.0 | 6.60e-01 | 75.0% | 82.5% |
| 3477992 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.87 | 63.0 | 6.58e-01 | 76.1% | 82.5% |
| 4895784 | 101.1.2.623 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25983 | 0.86 | 63.0 | 7.22e-01 | 77.3% | 100.0% |
| 4998878 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.86 | 61.0 | 6.82e-01 | 75.0% | 92.9% |
| 3694109 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.86 | 66.0 | 5.82e-01 | 80.7% | 58.3% |
| 3407631 | 109.4.1.1173 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PCI | 0.86 | 66.0 | 4.12e-01 | 80.7% | 17.5% |
| 4994269 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.86 | 60.0 | 6.10e-01 | 71.6% | 74.1% |
| 3597916 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 64.0 | 5.64e-01 | 80.7% | 55.2% |
| 4980926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 65.0 | 6.11e-01 | 79.5% | 66.7% |
| 3735508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 65.0 | 5.68e-01 | 80.7% | 56.0% |
| 3493997 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.85 | 58.0 | 6.28e-01 | 72.7% | 82.7% |
| 3615575 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.85 | 60.0 | 6.71e-01 | 75.0% | 92.9% |
| 3786690 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 64.0 | 4.82e-01 | 80.7% | 36.7% |
| 3796387 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.84 | 58.0 | 5.28e-01 | 73.9% | 54.8% |
| 4935247 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.84 | 62.0 | 5.90e-01 | 78.4% | 67.0% |
| 4948128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 60.0 | 6.86e-01 | 73.9% | 100.0% |
| 4025539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.84 | 58.0 | 6.27e-01 | 71.6% | 88.0% |
| 3849588 | 101.1.2.257 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI,CSN4_RPN5_eIF3a | 0.83 | 60.0 | 5.42e-01 | 75.0% | 59.1% |
| 4003350 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.83 | 59.0 | 6.52e-01 | 76.1% | 92.9% |
| 3281274 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.83 | 60.0 | 6.30e-01 | 75.0% | 87.5% |
| 4946834 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 57.0 | 6.36e-01 | 72.7% | 90.0% |
| 3318546 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.82 | 64.0 | 6.07e-01 | 80.7% | 73.0% |
| 3976357 | 101.1.2.270 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF977 | 0.82 | 55.0 | 5.39e-01 | 73.9% | 64.2% |
| 3795794 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.81 | 57.0 | 6.29e-01 | 76.1% | 91.4% |
| 3678273 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.81 | 55.0 | 4.37e-01 | 72.7% | 37.0% |
| 3942897 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 61.0 | 6.38e-01 | 78.4% | 92.5% |
| 4026548 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.81 | 55.0 | 5.29e-01 | 71.6% | 62.0% |
| 5065632 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 52.0 | 5.01e-01 | 71.6% | 59.0% |
| 3738604 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 59.0 | 5.52e-01 | 77.3% | 64.8% |
| 5028058 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 57.0 | 5.07e-01 | 75.0% | 97.5% |
| 4004380 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.78 | 54.0 | 4.92e-01 | 77.3% | 54.8% |
| 3588042 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 52.0 | 5.18e-01 | 71.6% | 66.7% |
| 3494091 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 55.0 | 5.40e-01 | 75.0% | 68.4% |
| 5001507 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 51.0 | 4.67e-01 | 70.5% | 54.5% |
| 5052425 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 57.0 | 5.67e-01 | 78.4% | 77.8% |
| 4992317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 49.0 | 4.32e-01 | 70.5% | 48.0% |
| 4983915 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 55.0 | 5.01e-01 | 79.5% | 97.4% |
| 3255880 | 101.1.2.511 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI, PF26569 | 0.71 | 51.0 | 4.77e-01 | 76.1% | 60.0% |
| 3739047 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 52.0 | 5.57e-01 | 79.5% | 90.7% |
| 4219514 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 51.0 | 5.35e-01 | 79.5% | 85.0% |
| 3685184 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.68 | 51.0 | 4.71e-01 | 79.5% | 60.9% |
| 3896790 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 51.0 | 5.48e-01 | 81.8% | 92.0% |
| 3698981 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.68 | 52.0 | 5.63e-01 | 80.7% | 94.7% |