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IMGVR_UViG_3300009685_001255-3300009685-Ga0116142_100021058
Arc-VirIMGVR_UViG_3300009685_001255-3300009685-Ga0116142_100021058
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-54
Domain cluster:
representative
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3705575 | 220.1.1.128 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SPT16 | 0.94 | 67.0 | 4.52e-01 | 74.1% | 24.2% |
| 3481125 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.85 | 57.0 | 4.12e-01 | 70.4% | 26.9% |
| 4313394 | 2007.1.6.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH | 0.74 | 46.0 | 3.50e-01 | 74.1% | 27.2% |
| 3324518 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.66 | 51.0 | 3.11e-01 | 83.3% | 91.9% |
| 3355500 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 45.0 | 2.58e-01 | 87.0% | 64.8% |
| 3608984 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 41.0 | 2.32e-01 | 100.0% | 32.7% |
D2
medium
residues 55-163
Domain cluster:
rep: IMGVR_UViG_3300031853_000142-3300031853-Ga0326514_1000024817__D42-135
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7onnA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 28.0 | 3.34e-01 | 78.9% | 85.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3962932 | 301.8.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase | 0.57 | 30.0 | 2.89e-01 | 97.2% | 40.8% |
| 2784067 | 3702.1.1.2 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer_2 | 0.50 | 28.0 | 3.32e-01 | 78.9% | 84.1% |