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IMGVR_UViG_3300009687_000511-3300009687-Ga0116144_100216455
Arc-VirIMGVR_UViG_3300009687_000511-3300009687-Ga0116144_100216455
Identity
- Kingdom:
- archaea
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-58
Domain cluster:
rep: MK071653.1__AZF88242.1__X__00002__D6-61
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 61.0 | 6.25e-01 | 74.1% | 76.8% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 65.0 | 5.24e-01 | 81.0% | 46.7% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 65.0 | 6.65e-01 | 84.5% | 100.0% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 57.0 | 5.72e-01 | 75.9% | 72.4% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 61.0 | 5.48e-01 | 81.0% | 61.3% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 64.0 | 6.15e-01 | 87.9% | 76.9% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.80 | 59.0 | 3.92e-01 | 79.3% | 21.8% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 60.0 | 5.73e-01 | 82.8% | 71.2% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 58.0 | 5.94e-01 | 77.6% | 92.9% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 60.0 | 6.40e-01 | 87.9% | 95.9% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 62.0 | 6.17e-01 | 86.2% | 100.0% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 57.0 | 5.12e-01 | 79.3% | 56.2% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.78 | 54.0 | 4.12e-01 | 72.4% | 33.6% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 55.0 | 6.09e-01 | 82.8% | 95.6% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 62.0 | 6.10e-01 | 87.9% | 81.0% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 55.0 | 5.97e-01 | 79.3% | 89.6% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 56.0 | 5.55e-01 | 81.0% | 73.3% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 58.0 | 6.17e-01 | 82.8% | 90.2% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 55.0 | 6.09e-01 | 75.9% | 100.0% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 56.0 | 5.55e-01 | 79.3% | 73.8% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 56.0 | 5.21e-01 | 79.3% | 62.5% |
| 1a9xA04 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.76 | 60.0 | 4.47e-01 | 87.9% | 65.3% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.76 | 63.0 | 4.10e-01 | 94.8% | 21.1% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.76 | 57.0 | 4.83e-01 | 81.0% | 55.3% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 60.0 | 5.56e-01 | 86.2% | 72.2% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 54.0 | 4.68e-01 | 79.3% | 50.6% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 56.0 | 5.81e-01 | 81.0% | 88.9% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 5.01e-01 | 75.9% | 71.8% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 58.0 | 5.80e-01 | 82.8% | 93.1% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 59.0 | 4.82e-01 | 86.2% | 52.4% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 5.25e-01 | 77.6% | 71.9% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 4.89e-01 | 75.9% | 69.9% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 5.61e-01 | 91.4% | 100.0% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 5.22e-01 | 77.6% | 71.4% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.21e-01 | 81.0% | 48.1% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 5.61e-01 | 77.6% | 90.0% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 5.35e-01 | 82.8% | 80.6% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 5.63e-01 | 81.0% | 87.3% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 5.16e-01 | 82.8% | 70.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.72 | 51.0 | 5.21e-01 | 75.9% | 76.8% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 56.0 | 5.24e-01 | 82.8% | 75.7% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 4.85e-01 | 84.5% | 59.0% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 55.0 | 5.03e-01 | 82.8% | 64.5% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 4.40e-01 | 79.3% | 48.9% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.71 | 55.0 | 4.12e-01 | 84.5% | 41.7% |
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.71 | 51.0 | 3.90e-01 | 79.3% | 38.9% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 4.85e-01 | 75.9% | 71.2% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.25e-01 | 79.3% | 78.0% |
| 2p5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.41e-01 | 79.3% | 90.4% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 5.70e-01 | 82.8% | 96.0% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 5.30e-01 | 84.5% | 77.4% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 5.23e-01 | 84.5% | 77.3% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 53.0 | 5.24e-01 | 82.8% | 84.1% |
| 1umqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 48.0 | 4.80e-01 | 72.4% | 71.7% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 55.0 | 5.66e-01 | 86.2% | 100.0% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 55.0 | 5.34e-01 | 86.2% | 98.5% |
| 4x0qA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.69 | 51.0 | 3.88e-01 | 81.0% | 40.3% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 5.22e-01 | 86.2% | 74.6% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 4.98e-01 | 84.5% | 68.1% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 5.21e-01 | 91.4% | 97.3% |
| 2lvsA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 47.0 | 5.01e-01 | 79.3% | 87.8% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 4.24e-01 | 79.3% | 50.0% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.50e-01 | 82.8% | 68.2% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 4.62e-01 | 86.2% | 84.5% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.60e-01 | 84.5% | 85.2% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.60e-01 | 86.2% | 85.0% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.44e-01 | 84.5% | 87.5% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.51e-01 | 84.5% | 73.7% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.63 | 46.0 | 4.46e-01 | 82.8% | 72.9% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.72e-01 | 91.4% | 95.7% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 52.0 | 5.06e-01 | 94.8% | 100.0% |
| 3c07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 49.0 | 3.44e-01 | 96.6% | 59.3% |
| 1k6kA00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.59 | 40.0 | 3.07e-01 | 75.9% | 28.9% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3389608 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.89 | 64.0 | 6.91e-01 | 75.9% | 88.0% |
| 3588551 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.87 | 64.0 | 6.37e-01 | 77.6% | 75.0% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.86 | 61.0 | 6.78e-01 | 74.1% | 97.8% |
| 3587644 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.85 | 65.0 | 6.44e-01 | 81.0% | 90.0% |
| 4458444 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 69.0 | 5.78e-01 | 87.9% | 53.7% |
| 3707219 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.84 | 63.0 | 4.88e-01 | 81.0% | 38.3% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.83 | 61.0 | 4.21e-01 | 81.0% | 25.0% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 61.0 | 6.49e-01 | 79.3% | 94.0% |
| 5006645 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.83 | 64.0 | 6.34e-01 | 82.8% | 78.3% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.82 | 60.0 | 6.22e-01 | 79.3% | 81.8% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 63.0 | 5.72e-01 | 82.8% | 62.7% |
| 4010691 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.82 | 60.0 | 6.14e-01 | 79.3% | 80.0% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.82 | 71.0 | 4.42e-01 | 96.6% | 59.4% |
| 4034200 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.82 | 63.0 | 6.02e-01 | 82.8% | 72.3% |
| 3239905 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.82 | 63.0 | 5.51e-01 | 86.2% | 56.5% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.81 | 60.0 | 6.40e-01 | 81.0% | 90.0% |
| 3590885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 61.0 | 5.68e-01 | 79.3% | 65.7% |
| 3972270 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.81 | 58.0 | 5.48e-01 | 79.3% | 62.9% |
| 4270741 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 53.0 | 6.15e-01 | 72.4% | 100.0% |
| 3942695 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.80 | 59.0 | 5.72e-01 | 79.3% | 69.2% |
| 3409145 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.80 | 54.0 | 5.81e-01 | 70.7% | 82.0% |
| 4334657 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.80 | 54.0 | 6.02e-01 | 77.6% | 91.1% |
| 3505559 | 101.1.6.19 ↗ | alpha arrays › HTH › HTH › TrpR › PAX | 0.80 | 61.0 | 5.55e-01 | 84.5% | 62.7% |
| 3277186 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.80 | 60.0 | 4.65e-01 | 81.0% | 46.4% |
| 3943462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 61.0 | 6.23e-01 | 84.5% | 85.5% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 61.0 | 5.91e-01 | 87.9% | 73.8% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.79 | 57.0 | 6.09e-01 | 79.3% | 88.0% |
| 4993585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 55.0 | 5.44e-01 | 72.4% | 70.0% |
| 3997733 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 69.0 | 6.65e-01 | 96.6% | 90.8% |
| 5004841 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 58.0 | 5.59e-01 | 77.6% | 69.2% |
| 4010213 | 101.1.1.218 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS1 | 0.79 | 58.0 | 6.17e-01 | 77.6% | 90.0% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.79 | 62.0 | 5.82e-01 | 84.5% | 71.4% |
| 3904156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 56.0 | 6.24e-01 | 75.9% | 97.8% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.79 | 57.0 | 6.27e-01 | 81.0% | 100.0% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.78 | 63.0 | 6.13e-01 | 87.9% | 81.5% |
| 4280807 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.78 | 61.0 | 6.32e-01 | 84.5% | 90.9% |
| 3706139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 59.0 | 6.22e-01 | 84.5% | 94.0% |
| 3704770 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.78 | 62.0 | 4.75e-01 | 86.2% | 55.4% |
| 3913655 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.78 | 67.0 | 5.99e-01 | 94.8% | 75.0% |
| 4002185 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.77 | 58.0 | 5.29e-01 | 84.5% | 61.3% |
| 5056682 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 6.16e-01 | 94.8% | 77.1% |
| 3998880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 66.0 | 5.58e-01 | 94.8% | 62.1% |
| 3423772 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.77 | 56.0 | 4.52e-01 | 79.3% | 50.4% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 56.0 | 5.58e-01 | 77.6% | 75.0% |
| 1764926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 53.0 | 5.74e-01 | 72.4% | 91.7% |
| 4990647 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 59.0 | 6.11e-01 | 84.5% | 98.2% |
| 3509159 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.77 | 57.0 | 5.70e-01 | 84.5% | 76.7% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 6.30e-01 | 93.1% | 95.4% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.76 | 58.0 | 5.83e-01 | 84.5% | 80.0% |
| 4214638 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 58.0 | 5.95e-01 | 81.0% | 87.3% |
| 3568862 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.76 | 57.0 | 5.47e-01 | 84.5% | 70.8% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.76 | 55.0 | 5.35e-01 | 79.3% | 69.2% |
| 3883738 | 101.1.3.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_4 | 0.76 | 64.0 | 5.56e-01 | 96.6% | 61.1% |
| 3290024 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.76 | 59.0 | 5.23e-01 | 82.8% | 67.5% |
| 3090474 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.76 | 65.0 | 4.83e-01 | 93.1% | 39.9% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.75 | 65.0 | 4.16e-01 | 96.6% | 23.4% |
| 3887530 | 101.1.10.41 ↗ | alpha arrays › HTH › HTH › Cyclin-like › HTH_Tnp_4 | 0.75 | 64.0 | 5.51e-01 | 96.6% | 61.1% |
| 5071227 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.75 | 66.0 | 4.16e-01 | 100.0% | 58.7% |
| 3892817 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.75 | 64.0 | 5.55e-01 | 96.6% | 62.2% |
| 5050152 | 101.1.3.35 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Terminase_5 | 0.74 | 53.0 | 5.69e-01 | 75.9% | 88.0% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.74 | 57.0 | 5.71e-01 | 84.5% | 80.0% |
| 5053252 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.74 | 57.0 | 4.65e-01 | 84.5% | 53.6% |
| 3410877 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 60.0 | 5.64e-01 | 93.1% | 74.3% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.74 | 55.0 | 5.31e-01 | 84.5% | 70.8% |
| 3873677 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.74 | 56.0 | 5.26e-01 | 84.5% | 67.1% |
| 3966025 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 57.0 | 5.26e-01 | 82.8% | 71.6% |
| 5059633 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.74 | 52.0 | 5.34e-01 | 75.9% | 78.2% |
| 5043001 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.74 | 57.0 | 4.64e-01 | 82.8% | 61.9% |
| 3985633 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.74 | 59.0 | 6.04e-01 | 91.4% | 94.5% |
| 3932648 | 101.1.1.195 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 | 0.74 | 56.0 | 5.79e-01 | 86.2% | 87.3% |
| 3404418 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.74 | 56.0 | 5.24e-01 | 82.8% | 67.1% |
| 5007028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.73 | 53.0 | 5.46e-01 | 77.6% | 81.8% |
| 3946608 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.73 | 57.0 | 5.33e-01 | 82.8% | 77.1% |
| 5062184 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.73 | 53.0 | 5.27e-01 | 82.8% | 75.0% |
| 4560931 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 55.0 | 5.04e-01 | 81.0% | 66.7% |
| 3374351 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.73 | 51.0 | 5.41e-01 | 74.1% | 92.0% |
| 3565285 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.72 | 55.0 | 5.28e-01 | 84.5% | 72.3% |
| 4659976 | 101.1.1.25 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF433 | 0.72 | 60.0 | 4.51e-01 | 93.1% | 63.6% |
| 4937081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 58.0 | 5.65e-01 | 87.9% | 78.5% |
| 3783362 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.72 | 62.0 | 3.52e-01 | 96.6% | 63.3% |
| 3890615 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.72 | 53.0 | 5.69e-01 | 84.5% | 92.0% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.72 | 56.0 | 5.42e-01 | 87.9% | 75.4% |
| 3191582 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.72 | 59.0 | 4.59e-01 | 93.1% | 43.1% |
| 3572145 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 56.0 | 5.73e-01 | 84.5% | 92.7% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.71 | 55.0 | 5.47e-01 | 82.8% | 83.3% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.71 | 55.0 | 5.69e-01 | 91.4% | 90.9% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.71 | 58.0 | 5.31e-01 | 87.9% | 78.7% |
| 4945046 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 52.0 | 4.27e-01 | 77.6% | 42.9% |
| 3590546 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.70 | 57.0 | 5.89e-01 | 94.8% | 100.0% |
| 3767621 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.70 | 54.0 | 4.83e-01 | 84.5% | 60.0% |
| 3928067 | 101.1.1.356 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 | 0.70 | 52.0 | 5.32e-01 | 81.0% | 83.6% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 53.0 | 5.25e-01 | 82.8% | 83.3% |
| 5032601 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 56.0 | 5.71e-01 | 87.9% | 92.7% |
| 3597464 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 54.0 | 5.34e-01 | 87.9% | 83.3% |
| 3937075 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.68 | 52.0 | 5.32e-01 | 84.5% | 87.3% |
| 3948900 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.63 | 50.0 | 4.65e-01 | 87.9% | 77.3% |
D2
medium
residues 59-130
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.90 | 69.0 | 5.69e-01 | 79.2% | 53.4% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 64.0 | 4.95e-01 | 76.4% | 57.1% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 68.0 | 5.84e-01 | 84.7% | 57.1% |
| 1zymA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.84 | 61.0 | 4.94e-01 | 75.0% | 44.4% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.83 | 57.0 | 4.67e-01 | 70.8% | 41.1% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.83 | 58.0 | 5.11e-01 | 79.2% | 51.0% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.83 | 65.0 | 4.05e-01 | 83.3% | 67.4% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.82 | 57.0 | 5.66e-01 | 79.2% | 68.4% |
| 3bqoA00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.82 | 59.0 | 4.18e-01 | 91.7% | 26.7% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.82 | 59.0 | 5.81e-01 | 83.3% | 72.0% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.82 | 62.0 | 5.96e-01 | 79.2% | 88.7% |
| 1vh6A01 | 6.10.140.1940 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 55.0 | 4.93e-01 | 70.8% | 51.5% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.81 | 57.0 | 5.65e-01 | 73.6% | 69.7% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.81 | 51.0 | 5.37e-01 | 73.6% | 71.9% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.81 | 53.0 | 6.16e-01 | 81.9% | 94.2% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 61.0 | 6.27e-01 | 84.7% | 82.6% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.80 | 60.0 | 4.95e-01 | 79.2% | 79.8% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 54.0 | 5.50e-01 | 70.8% | 100.0% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.79 | 58.0 | 5.30e-01 | 76.4% | 59.8% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 60.0 | 4.66e-01 | 84.7% | 39.6% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.79 | 61.0 | 5.46e-01 | 81.9% | 68.0% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.78 | 57.0 | 5.31e-01 | 77.8% | 63.2% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.78 | 69.0 | 5.03e-01 | 94.4% | 67.4% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.78 | 60.0 | 5.22e-01 | 86.1% | 55.7% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.77 | 56.0 | 5.45e-01 | 83.3% | 70.1% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.76 | 59.0 | 6.21e-01 | 90.3% | 90.6% |
| 2pihA00 | 1.20.1500.10 | Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like | 0.76 | 64.0 | 5.30e-01 | 90.3% | 52.8% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 60.0 | 4.57e-01 | 84.7% | 38.7% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.76 | 65.0 | 5.04e-01 | 93.1% | 76.2% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.76 | 57.0 | 4.95e-01 | 84.7% | 53.8% |
| 2lf0A01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.75 | 57.0 | 6.13e-01 | 83.3% | 96.7% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.75 | 55.0 | 5.24e-01 | 76.4% | 68.3% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.75 | 64.0 | 4.48e-01 | 91.7% | 50.2% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.74 | 63.0 | 5.52e-01 | 90.3% | 78.4% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.74 | 65.0 | 5.37e-01 | 94.4% | 74.4% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 54.0 | 5.29e-01 | 79.2% | 79.2% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.72 | 54.0 | 5.03e-01 | 79.2% | 67.8% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 53.0 | 5.25e-01 | 79.2% | 76.0% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 61.0 | 6.15e-01 | 91.7% | 95.9% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 54.0 | 5.70e-01 | 80.6% | 93.5% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.71 | 61.0 | 5.38e-01 | 90.3% | 89.0% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 62.0 | 5.25e-01 | 94.4% | 84.1% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 5.25e-01 | 80.6% | 98.6% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.70 | 54.0 | 5.05e-01 | 81.9% | 67.8% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.69 | 56.0 | 4.45e-01 | 86.1% | 68.3% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 64.0 | 4.62e-01 | 100.0% | 78.5% |
| 5tpmB00 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.69 | 56.0 | 4.38e-01 | 86.1% | 70.9% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.69 | 63.0 | 5.11e-01 | 100.0% | 95.3% |
| 1e52A00 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.68 | 48.0 | 5.21e-01 | 73.6% | 94.6% |
| 4uskA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.68 | 54.0 | 4.15e-01 | 84.7% | 48.7% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 57.0 | 5.21e-01 | 90.3% | 77.4% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 56.0 | 4.73e-01 | 91.7% | 66.7% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.68 | 56.0 | 4.81e-01 | 90.3% | 81.4% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.68 | 49.0 | 4.93e-01 | 76.4% | 80.3% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.67 | 50.0 | 5.15e-01 | 80.6% | 82.9% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 59.0 | 5.46e-01 | 100.0% | 82.4% |
| 3craB01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.66 | 56.0 | 5.32e-01 | 93.1% | 81.4% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.62 | 55.0 | 4.59e-01 | 94.4% | 72.4% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019661 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.92 | 70.0 | 5.93e-01 | 79.2% | 51.8% |
| 3560590 | 3755.3.1.142 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C | 0.90 | 69.0 | 5.20e-01 | 79.2% | 38.0% |
| 3766955 | 192.7.1.17 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FAM186A-B_C | 0.90 | 69.0 | 5.27e-01 | 79.2% | 39.3% |
| 4930198 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.89 | 65.0 | 7.07e-01 | 75.0% | 90.0% |
| 2811987 | 138.1.1.37 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › TVHS-like | 0.89 | 64.0 | 5.85e-01 | 86.1% | 58.7% |
| 3965106 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.89 | 68.0 | 6.68e-01 | 79.2% | 76.0% |
| 5050536 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.88 | 62.0 | 6.36e-01 | 86.1% | 75.7% |
| 5031890 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 66.0 | 4.41e-01 | 79.2% | 80.4% |
| 3781506 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.87 | 67.0 | 5.04e-01 | 80.6% | 37.4% |
| 4489484 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.86 | 65.0 | 3.91e-01 | 79.2% | 13.3% |
| 3336677 | 605.1.1.132 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 | 0.86 | 65.0 | 6.43e-01 | 79.2% | 76.0% |
| 4426045 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.86 | 65.0 | 5.01e-01 | 79.2% | 39.3% |
| 3560750 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.85 | 65.0 | 6.58e-01 | 79.2% | 81.4% |
| 4347101 | 5086.1.1.119 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › RRG1_C | 0.85 | 64.0 | 5.91e-01 | 79.2% | 63.3% |
| 3666875 | 1025.1.1.4 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain › DUF641 | 0.85 | 62.0 | 6.15e-01 | 76.4% | 73.3% |
| 3616031 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.84 | 66.0 | 5.86e-01 | 80.6% | 70.5% |
| 3296414 | 192.29.1.168 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF641 | 0.84 | 64.0 | 6.49e-01 | 79.2% | 81.4% |
| 3692994 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.84 | 65.0 | 4.15e-01 | 80.6% | 19.0% |
| 3491873 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.84 | 65.0 | 5.82e-01 | 80.6% | 61.1% |
| 3906819 | 192.17.1.6 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 | 0.84 | 64.0 | 4.94e-01 | 80.6% | 38.7% |
| 5025189 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.84 | 57.0 | 6.45e-01 | 73.6% | 92.7% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.83 | 63.0 | 5.20e-01 | 79.2% | 47.5% |
| 3694558 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.83 | 64.0 | 4.75e-01 | 80.6% | 35.2% |
| 3576866 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.83 | 62.0 | 4.51e-01 | 79.2% | 30.8% |
| 4930709 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.83 | 61.0 | 4.37e-01 | 79.2% | 28.7% |
| 4477580 | 5086.1.1.118 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp | 0.82 | 63.0 | 5.96e-01 | 80.6% | 68.2% |
| 3269590 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.82 | 63.0 | 5.28e-01 | 80.6% | 50.4% |
| 3613932 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.82 | 63.0 | 5.28e-01 | 80.6% | 84.3% |
| 4163282 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 60.0 | 4.32e-01 | 80.6% | 29.7% |
| 4386662 | 3291.1.1.158 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Seryl_tRNA_N | 0.82 | 61.0 | 5.17e-01 | 83.3% | 49.6% |
| 2750143 | 3758.1.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Bacillus_HBL | 0.81 | 61.0 | 4.43e-01 | 79.2% | 31.9% |
| 3520009 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.80 | 62.0 | 5.94e-01 | 80.6% | 86.3% |
| 3738041 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.80 | 61.0 | 5.79e-01 | 80.6% | 68.2% |
| 140767 | 632.8.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › DUF6853 | 0.80 | 60.0 | 4.95e-01 | 79.2% | 79.8% |
| 3559003 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.80 | 61.0 | 5.41e-01 | 80.6% | 97.0% |
| 4988301 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.80 | 61.0 | 4.70e-01 | 80.6% | 39.3% |
| 4177393 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 60.0 | 4.66e-01 | 79.2% | 66.2% |
| 4988623 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.79 | 60.0 | 4.01e-01 | 80.6% | 26.0% |
| 4235024 | 109.4.1.2782 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, PF30363, PF30475 | 0.79 | 70.0 | 3.96e-01 | 93.1% | 14.0% |
| 3425296 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.79 | 62.0 | 4.95e-01 | 83.3% | 71.1% |
| 3213282 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.79 | 63.0 | 6.24e-01 | 87.5% | 82.7% |
| 3868214 | 109.4.1.1302 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30363 | 0.79 | 68.0 | 5.10e-01 | 91.7% | 46.9% |
| 3246381 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.78 | 59.0 | 4.70e-01 | 80.6% | 44.3% |
| 3365701 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 61.0 | 5.24e-01 | 83.3% | 61.8% |
| 3775375 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 69.0 | 5.31e-01 | 95.8% | 78.7% |
| 4406698 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 57.0 | 5.19e-01 | 77.8% | 97.9% |
| 5024703 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.77 | 60.0 | 4.36e-01 | 83.3% | 31.6% |
| 4945931 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.77 | 61.0 | 6.27e-01 | 84.7% | 97.1% |
| 3589063 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.76 | 61.0 | 5.13e-01 | 87.5% | 53.3% |
| 4024277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.75 | 56.0 | 5.60e-01 | 79.2% | 81.3% |
| 3699098 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.75 | 57.0 | 5.50e-01 | 80.6% | 93.8% |
| 3952558 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.75 | 56.0 | 4.77e-01 | 79.2% | 50.4% |
| 3487203 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.75 | 60.0 | 5.63e-01 | 84.7% | 80.0% |
| 4384750 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.75 | 56.0 | 5.13e-01 | 80.6% | 64.2% |
| 3569669 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.75 | 56.0 | 4.09e-01 | 80.6% | 33.3% |
| 4219218 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.74 | 60.0 | 5.09e-01 | 84.7% | 61.8% |
| 3193532 | 622.4.1.35 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › PF26729 | 0.74 | 67.0 | 6.25e-01 | 100.0% | 88.9% |
| 5026881 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 55.0 | 5.48e-01 | 79.2% | 81.3% |
| 3737505 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.73 | 55.0 | 5.45e-01 | 80.6% | 81.3% |
| 4949471 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.72 | 57.0 | 4.23e-01 | 84.7% | 34.9% |
| 3470615 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.67 | 62.0 | 4.17e-01 | 98.6% | 57.1% |
| 4961158 | 5076.2.1.3 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF4013 | 0.63 | 50.0 | 3.63e-01 | 88.9% | 52.7% |
| 4953182 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.60 | 53.0 | 3.98e-01 | 98.6% | 55.0% |