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IMGVR_UViG_3300009688_000032-3300009688-Ga0116176_1000097017
Arc-VirIMGVR_UViG_3300009688_000032-3300009688-Ga0116176_1000097017
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-103
Domain cluster:
rep: NC_048678.1__YP_009835412.1__HWB33_gp20__00020__D44-99
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.75 | 52.0 | 3.45e-01 | 78.3% | 19.3% |
| 3kk4A01 | 1.10.3990.20 | Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 | 0.67 | 54.0 | 4.40e-01 | 86.7% | 73.4% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.67 | 58.0 | 3.54e-01 | 98.3% | 88.8% |
| 3rhtA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.63 | 44.0 | 2.86e-01 | 71.7% | 45.6% |
| 4c1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.63 | 45.0 | 2.79e-01 | 76.7% | 42.9% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 47.0 | 3.60e-01 | 90.0% | 49.3% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.55 | 37.0 | 3.17e-01 | 73.3% | 42.0% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 37.0 | 2.63e-01 | 70.0% | 30.6% |
| 3weeB03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 42.0 | 3.47e-01 | 86.7% | 51.3% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 36.0 | 2.43e-01 | 70.0% | 33.0% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 37.0 | 2.42e-01 | 73.3% | 38.9% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 43.0 | 3.54e-01 | 98.3% | 50.8% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.51 | 43.0 | 3.08e-01 | 93.3% | 52.8% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 28.0 | 2.61e-01 | 85.0% | 39.5% |
| 5mi7A03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.51 | 42.0 | 2.80e-01 | 93.3% | 36.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4987009 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.81 | 56.0 | 4.05e-01 | 78.3% | 28.7% |
| 4979113 | 620.1.1.6 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 | 0.73 | 51.0 | 3.75e-01 | 73.3% | 90.2% |
| 4965624 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.71 | 59.0 | 3.97e-01 | 98.3% | 83.0% |
| 3870961 | 109.4.1.498 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 | 0.68 | 59.0 | 3.47e-01 | 96.7% | 33.0% |
| 5023652 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 52.0 | 3.69e-01 | 86.7% | 63.8% |
| 3628455 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.65 | 53.0 | 3.11e-01 | 93.3% | 39.5% |
| 3448952 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.64 | 47.0 | 3.22e-01 | 78.3% | 38.5% |
| 3940795 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.64 | 51.0 | 3.05e-01 | 93.3% | 39.6% |
| 3591633 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.60 | 45.0 | 3.76e-01 | 81.7% | 83.6% |
| 3628950 | 5001.1.1.60 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx | 0.60 | 45.0 | 3.00e-01 | 80.0% | 39.1% |
| 3693637 | 10.12.1.9 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC | 0.60 | 47.0 | 2.89e-01 | 86.7% | 43.6% |
| 3250585 | 109.4.1.791 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 | 0.59 | 45.0 | 2.63e-01 | 83.3% | 13.3% |
| 3923359 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.58 | 40.0 | 2.57e-01 | 73.3% | 54.5% |
| 3770311 | 109.4.1.154 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FA_FANCE | 0.56 | 48.0 | 2.96e-01 | 98.3% | 20.8% |
| 3934910 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.55 | 39.0 | 2.69e-01 | 75.0% | 68.7% |
| 4946324 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.55 | 38.0 | 2.63e-01 | 71.7% | 43.2% |
| 3598841 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.54 | 44.0 | 2.98e-01 | 98.3% | 89.8% |
| 1145958 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.54 | 43.0 | 3.11e-01 | 86.7% | 35.2% |
| 3925962 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.54 | 38.0 | 2.46e-01 | 75.0% | 53.0% |
| 5006512 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.52 | 31.0 | 3.12e-01 | 90.0% | 56.7% |
| 4957561 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.52 | 35.0 | 3.00e-01 | 75.0% | 40.0% |
| 3901808 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.52 | 41.0 | 2.46e-01 | 96.7% | 63.8% |
| 3932516 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.52 | 44.0 | 2.86e-01 | 98.3% | 71.3% |
| 3926712 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.51 | 44.0 | 2.82e-01 | 98.3% | 71.9% |
| 3921728 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 38.0 | 3.13e-01 | 81.7% | 72.2% |
| 3661784 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 42.0 | 2.66e-01 | 95.0% | 77.2% |
| 4999237 | 301.2.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like | 0.50 | 39.0 | 2.71e-01 | 90.0% | 23.6% |
| 4351646 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 39.0 | 2.87e-01 | 88.3% | 84.9% |
| 4940950 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.50 | 34.0 | 3.08e-01 | 91.7% | 52.5% |
| 3236563 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.50 | 39.0 | 3.10e-01 | 85.0% | 68.8% |
| 4998663 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 37.0 | 2.94e-01 | 80.0% | 56.9% |