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IMGVR_UViG_3300009688_000032-3300009688-Ga0116176_1000097027

Arc-Vir

IMGVR_UViG_3300009688_000032-3300009688-Ga0116176_1000097027

Quality

84.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-58
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7vevA01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.73 50.0 3.13e-01 78.3% 13.3%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 45.0 3.05e-01 87.0% 20.0%
2b3yA02 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.59 43.0 3.17e-01 80.4% 31.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3884438 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.83 73.0 6.05e-01 100.0% 56.2%
4086147 3567.1.1.107 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › UPF0154 0.79 60.0 5.63e-01 80.4% 76.4%
4284336 192.29.1.176 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › UPF0154 0.79 60.0 5.62e-01 80.4% 76.4%
3624115 109.6.1.0 alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF 0.71 62.0 3.76e-01 100.0% 21.6%
D2 high residues 67-164
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04404.18 best ERF 42.5 9.20e-11 100.0% 60.8%