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IMGVR_UViG_3300009688_000032-3300009688-Ga0116176_1000097027
Arc-VirIMGVR_UViG_3300009688_000032-3300009688-Ga0116176_1000097027
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-58
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vevA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.73 | 50.0 | 3.13e-01 | 78.3% | 13.3% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 45.0 | 3.05e-01 | 87.0% | 20.0% |
| 2b3yA02 | 3.40.1060.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 | 0.59 | 43.0 | 3.17e-01 | 80.4% | 31.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3884438 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.83 | 73.0 | 6.05e-01 | 100.0% | 56.2% |
| 4086147 | 3567.1.1.107 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › UPF0154 | 0.79 | 60.0 | 5.63e-01 | 80.4% | 76.4% |
| 4284336 | 192.29.1.176 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › UPF0154 | 0.79 | 60.0 | 5.62e-01 | 80.4% | 76.4% |
| 3624115 | 109.6.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF | 0.71 | 62.0 | 3.76e-01 | 100.0% | 21.6% |
D2
high
residues 67-164
Domain cluster:
rep: KR072689.1__AKG94551.1__Shpa_40__00040__D72-163
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04404.18 best | ERF | 42.5 | 9.20e-11 | 100.0% | 60.8% |