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IMGVR_UViG_3300009688_000047-3300009688-Ga0116176_1000149120
Arc-VirIMGVR_UViG_3300009688_000047-3300009688-Ga0116176_1000149120
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-105_111-232
Domain cluster:
rep: MN718199.1__QGZ16029.1__Kuja_0380__00038__D35-98_136-255
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08804.17 best | gp32 | 57.9 | 2.20e-15 | 94.5% | 77.8% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gpcA00 | 3.90.198.10 | Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein | 0.85 | 77.0 | 7.52e-01 | 100.0% | 87.2% |
| 2e2dC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 31.0 | 4.38e-01 | 74.6% | 98.9% |
| 3tdqA00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.62 | 25.0 | 3.74e-01 | 76.6% | 86.0% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.60 | 24.0 | 2.99e-01 | 80.6% | 57.5% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 31.0 | 4.12e-01 | 78.6% | 95.5% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 21.0 | 2.93e-01 | 84.1% | 66.7% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 21.0 | 2.97e-01 | 85.6% | 72.7% |
| 3uh8A00 | 2.60.40.3350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 22.0 | 2.84e-01 | 88.6% | 62.7% |
| 4ckbD03 | 2.40.50.830 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 31.0 | 3.64e-01 | 83.6% | 84.3% |
| 4dimA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 33.0 | 3.32e-01 | 92.0% | 61.2% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.51 | 19.0 | 3.05e-01 | 92.5% | 93.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 378 | 2.1.1.45 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 | 0.84 | 76.0 | 7.53e-01 | 99.0% | 89.5% |
| 3942656 | 2.1.1.45 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 | 0.71 | 62.0 | 6.19e-01 | 100.0% | 90.7% |
| 3491615 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 25.0 | 2.38e-01 | 82.6% | 29.6% |
| 4874611 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.59 | 25.0 | 3.07e-01 | 82.1% | 58.5% |
| 395 | 2.2.1.7 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertus-S4-tox | 0.58 | 31.0 | 4.12e-01 | 78.6% | 95.5% |
| 3624793 | 2.1.1.274 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7930 | 0.56 | 24.0 | 3.60e-01 | 77.1% | 97.5% |
| 3243618 | 2.1.1.274 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7930 | 0.53 | 25.0 | 3.47e-01 | 77.6% | 90.5% |
| 4955484 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 22.0 | 2.91e-01 | 83.6% | 68.2% |
| 3559409 | 11.1.1.609 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NTCP5_P3_N | 0.52 | 23.0 | 3.03e-01 | 87.1% | 73.3% |
| 3764241 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 23.0 | 2.89e-01 | 85.1% | 65.4% |
| 5037019 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 19.0 | 2.69e-01 | 75.6% | 68.4% |
| 3510263 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.50 | 24.0 | 2.75e-01 | 82.1% | 59.3% |