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IMGVR_UViG_3300009688_000047-3300009688-Ga0116176_1000149124
Arc-VirIMGVR_UViG_3300009688_000047-3300009688-Ga0116176_1000149124
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-113
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.70 | 65.0 | 5.77e-01 | 100.0% | 83.4% |
| 1v47A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.67 | 54.0 | 5.01e-01 | 86.7% | 96.2% |
| 8a8gA01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.65 | 52.0 | 4.74e-01 | 85.7% | 90.7% |
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.63 | 54.0 | 5.54e-01 | 91.4% | 100.0% |
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.62 | 57.0 | 5.07e-01 | 100.0% | 82.9% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 47.0 | 4.49e-01 | 86.7% | 69.4% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.57 | 52.0 | 3.91e-01 | 100.0% | 56.9% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.57 | 33.0 | 3.91e-01 | 70.5% | 86.8% |
| 3pnrA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 41.0 | 3.14e-01 | 78.1% | 84.6% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.55 | 38.0 | 3.60e-01 | 71.4% | 93.7% |
| 1eq9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 40.0 | 4.00e-01 | 84.8% | 76.2% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.54 | 40.0 | 3.64e-01 | 78.1% | 81.9% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 37.0 | 2.97e-01 | 81.0% | 34.2% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 39.0 | 4.10e-01 | 81.0% | 87.1% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 39.0 | 3.23e-01 | 79.0% | 99.5% |
| 1ntpA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 38.0 | 3.84e-01 | 85.7% | 75.7% |
| 6fdfA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 3.17e-01 | 78.1% | 82.6% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 3.84e-01 | 91.4% | 85.7% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 33.0 | 3.45e-01 | 79.0% | 69.7% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.51 | 43.0 | 3.49e-01 | 94.3% | 91.9% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 36.0 | 3.84e-01 | 82.9% | 86.7% |
| 2fgeA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 42.0 | 3.23e-01 | 91.4% | 91.2% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 44.0 | 4.16e-01 | 97.1% | 82.2% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 33.0 | 3.59e-01 | 79.0% | 79.8% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 35.0 | 3.36e-01 | 71.4% | 90.2% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940359 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 67.0 | 5.52e-01 | 100.0% | 82.2% |
| 4178357 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 43.0 | 5.21e-01 | 85.7% | 95.4% |
| 4179343 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 42.0 | 5.14e-01 | 89.5% | 95.4% |
| 21948 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.70 | 65.0 | 5.90e-01 | 100.0% | 89.0% |
| 5006840 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.69 | 62.0 | 5.80e-01 | 100.0% | 89.9% |
| 5043613 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.68 | 61.0 | 5.81e-01 | 100.0% | 90.4% |
| 4939497 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.68 | 62.0 | 5.85e-01 | 100.0% | 92.8% |
| 4961858 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.68 | 62.0 | 5.50e-01 | 100.0% | 82.7% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 55.0 | 5.54e-01 | 86.7% | 100.0% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.67 | 57.0 | 5.43e-01 | 92.4% | 90.4% |
| 172 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.67 | 54.0 | 5.02e-01 | 86.7% | 97.0% |
| 3387963 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 54.0 | 5.08e-01 | 86.7% | 98.4% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.66 | 55.0 | 5.43e-01 | 88.6% | 97.3% |
| 4202541 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.66 | 59.0 | 5.79e-01 | 100.0% | 91.3% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.66 | 56.0 | 5.42e-01 | 90.5% | 99.1% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.66 | 56.0 | 5.54e-01 | 91.4% | 95.5% |
| 4354776 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.65 | 53.0 | 4.41e-01 | 88.6% | 83.8% |
| 3943282 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 50.0 | 4.77e-01 | 86.7% | 71.7% |
| 5067189 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 58.0 | 4.87e-01 | 100.0% | 72.6% |
| 4024275 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.63 | 49.0 | 4.75e-01 | 82.9% | 86.1% |
| 4600281 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.62 | 50.0 | 5.00e-01 | 86.7% | 92.7% |
| 4958010 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.62 | 42.0 | 4.84e-01 | 87.6% | 100.0% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 56.0 | 5.44e-01 | 100.0% | 99.1% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.61 | 56.0 | 5.35e-01 | 100.0% | 92.5% |
| 4220790 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.60 | 49.0 | 4.81e-01 | 87.6% | 93.9% |
| 4026343 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.60 | 41.0 | 4.33e-01 | 79.0% | 77.9% |
| 4493293 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.60 | 47.0 | 4.65e-01 | 84.8% | 94.5% |
| 1125236 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.60 | 46.0 | 4.61e-01 | 83.8% | 95.4% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 53.0 | 5.01e-01 | 99.0% | 88.8% |
| 4189243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.59 | 46.0 | 4.26e-01 | 85.7% | 66.2% |
| 2407461 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.59 | 47.0 | 4.34e-01 | 84.8% | 69.5% |
| 5040331 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 49.0 | 4.47e-01 | 93.3% | 96.6% |
| 2756655 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.58 | 46.0 | 4.03e-01 | 85.7% | 65.2% |
| 3183073 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.57 | 46.0 | 3.47e-01 | 88.6% | 52.2% |
| 224015 | 1.1.9.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › RE_AspBHI_N | 0.57 | 51.0 | 3.83e-01 | 100.0% | 56.0% |
| 3978063 | 304.51.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc | 0.56 | 45.0 | 4.18e-01 | 84.8% | 91.5% |
| 5067070 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.56 | 45.0 | 4.15e-01 | 88.6% | 87.1% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.55 | 44.0 | 3.96e-01 | 88.6% | 76.1% |
| 4025055 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.55 | 41.0 | 4.28e-01 | 83.8% | 86.3% |
| 5046705 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.55 | 39.0 | 3.98e-01 | 76.2% | 75.2% |
| 4659258 | 2003.1.5.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT | 0.55 | 41.0 | 3.31e-01 | 80.0% | 40.9% |
| 3603235 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.55 | 39.0 | 4.01e-01 | 85.7% | 78.0% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.54 | 44.0 | 4.20e-01 | 88.6% | 96.0% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 46.0 | 4.27e-01 | 96.2% | 93.3% |
| 3736128 | 868.1.1.8 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C | 0.54 | 40.0 | 3.09e-01 | 79.0% | 74.8% |
| 3504078 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.54 | 43.0 | 3.24e-01 | 85.7% | 87.1% |
| 3926912 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.54 | 43.0 | 3.77e-01 | 86.7% | 94.4% |
| 4832854 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.54 | 47.0 | 4.42e-01 | 97.1% | 93.0% |
| 5062289 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.53 | 44.0 | 4.60e-01 | 99.0% | 98.9% |
| 3967199 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 46.0 | 4.62e-01 | 100.0% | 96.2% |
| 3244272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 3.86e-01 | 78.1% | 96.5% |
| 4340137 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 3.23e-01 | 95.2% | 48.6% |
| 3784272 | 1.1.7.102 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF28793 | 0.53 | 46.0 | 4.47e-01 | 99.0% | 96.7% |
| 4956189 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.52 | 35.0 | 3.89e-01 | 73.3% | 87.5% |
| 5080510 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.52 | 38.0 | 4.02e-01 | 88.6% | 85.3% |
| 3472240 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.52 | 38.0 | 3.15e-01 | 78.1% | 54.0% |
| 4400919 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.52 | 34.0 | 3.86e-01 | 72.4% | 92.0% |
| 164720 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 42.0 | 3.84e-01 | 91.4% | 85.7% |
| 3973282 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.51 | 45.0 | 4.52e-01 | 100.0% | 97.3% |
| 3973898 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.51 | 45.0 | 4.13e-01 | 100.0% | 78.6% |
| 4018634 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.51 | 38.0 | 3.70e-01 | 78.1% | 99.1% |
| 3987460 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.51 | 45.0 | 4.49e-01 | 100.0% | 98.2% |
| 4978362 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.51 | 35.0 | 4.00e-01 | 78.1% | 95.0% |
| 3430260 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 43.0 | 3.08e-01 | 96.2% | 67.5% |