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IMGVR_UViG_3300009688_000661-3300009688-Ga0116176_1000116232

Arc-Vir

IMGVR_UViG_3300009688_000661-3300009688-Ga0116176_1000116232

Quality

60.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 282-407
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01551.30 best Peptidase_M23 55.5 7.70e-15 88.9% 99.0%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hsiB02 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.91 75.0 7.10e-01 100.0% 74.0%
4bh5A00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.85 76.0 7.50e-01 100.0% 89.2%
1qwyA02 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.85 78.0 6.88e-01 99.2% 69.8%
7qrlA01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.84 75.0 7.36e-01 96.8% 87.4%
2gu1A03 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.82 75.0 7.39e-01 100.0% 90.9%
4rnyA03 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.82 74.0 7.36e-01 100.0% 92.2%
6jn7A01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.81 75.0 6.59e-01 100.0% 69.7%
3tufB00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.80 77.0 7.02e-01 100.0% 84.2%
3it5G00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.74 71.0 6.17e-01 100.0% 70.0%
3csqA02 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.74 70.0 6.34e-01 100.0% 90.9%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.63 30.0 3.69e-01 73.0% 70.0%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.61 32.0 4.26e-01 72.2% 93.0%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.58 32.0 3.03e-01 76.2% 44.1%
5lohB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 31.0 4.07e-01 70.6% 91.9%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.58 36.0 4.37e-01 77.0% 97.6%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.57 50.0 3.77e-01 92.9% 45.0%
4ktpA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.56 48.0 3.83e-01 92.1% 48.4%
4nyqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 30.0 2.89e-01 72.2% 41.8%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 3.76e-01 78.6% 75.2%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 32.0 2.86e-01 72.2% 41.7%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.53 29.0 3.21e-01 75.4% 65.3%
1xszA03 3.30.310.140 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › sec7 domains 0.53 46.0 4.30e-01 96.0% 91.1%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 47.0 3.60e-01 100.0% 88.0%
3zxkA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.81e-01 99.2% 98.1%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.51 35.0 3.57e-01 75.4% 71.8%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4371098 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.89 75.0 7.70e-01 100.0% 90.8%
4379172 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.89 76.0 7.50e-01 100.0% 84.2%
3290826 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.89 78.0 7.01e-01 100.0% 70.1%
3965283 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.87 75.0 7.62e-01 99.2% 91.1%
3590598 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.87 78.0 7.71e-01 100.0% 88.7%
3984086 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.86 75.0 6.33e-01 98.4% 58.5%
3974471 325.1.6.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif 0.86 79.0 7.68e-01 100.0% 88.1%
1513000 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.86 74.0 6.49e-01 100.0% 64.7%
3056400 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.85 76.0 7.47e-01 100.0% 88.5%
4941596 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.85 82.0 7.16e-01 100.0% 87.4%
3966112 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.85 78.0 6.79e-01 100.0% 68.0%
3961687 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.85 81.0 6.65e-01 100.0% 89.5%
4471307 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.85 79.0 7.51e-01 100.0% 84.7%
5073481 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.84 80.0 6.49e-01 100.0% 90.0%
1891424 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.84 73.0 7.45e-01 93.7% 92.6%
3387971 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.84 78.0 6.84e-01 100.0% 69.7%
3279250 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.84 78.0 7.53e-01 100.0% 87.9%
4416013 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.84 79.0 7.13e-01 100.0% 76.9%
3386468 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.84 78.0 6.98e-01 100.0% 73.9%
4931567 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.83 80.0 6.77e-01 100.0% 85.8%
4034361 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.83 76.0 7.40e-01 100.0% 88.1%
4032028 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.83 80.0 6.90e-01 100.0% 86.7%
3385726 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.83 78.0 6.23e-01 100.0% 55.9%
3968533 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.82 79.0 7.36e-01 100.0% 85.3%
2663449 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.82 74.0 7.36e-01 100.0% 91.5%
None 0.82 75.0 7.37e-01 100.0% 89.6%
2774289 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.81 75.0 6.77e-01 100.0% 74.2%
4032307 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.81 78.0 7.48e-01 100.0% 90.0%
2573963 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.81 75.0 6.44e-01 100.0% 65.6%
3966987 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.81 78.0 6.98e-01 100.0% 82.9%
3957060 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.80 71.0 6.73e-01 100.0% 80.0%
216296 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.80 77.0 7.02e-01 100.0% 84.2%
4999158 325.1.6.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif 0.80 76.0 6.07e-01 100.0% 71.7%
1907311 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.79 75.0 7.11e-01 100.0% 89.8%
5079376 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.77 73.0 6.37e-01 100.0% 80.9%
3578525 325.1.6.6 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26730 0.76 72.0 6.54e-01 100.0% 84.4%
5078228 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.76 72.0 6.55e-01 100.0% 88.1%
4978013 325.1.6.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif 0.76 72.0 5.95e-01 100.0% 77.6%
3229193 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.76 71.0 6.60e-01 100.0% 89.7%
1173319 325.1.6.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif 0.74 70.0 6.37e-01 100.0% 92.0%
3928836 325.1.6.6 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26730 0.74 69.0 6.28e-01 100.0% 88.1%
5072111 325.1.6.9 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26482 0.72 67.0 6.24e-01 100.0% 87.1%
4945243 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.70 66.0 6.00e-01 100.0% 87.5%
3602312 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.69 65.0 5.77e-01 100.0% 90.3%
5081813 325.1.7.38 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PS_Dcarbxylase 0.69 65.0 6.06e-01 100.0% 89.3%
4626250 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.67 63.0 5.74e-01 100.0% 79.8%
4497129 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.67 62.0 5.64e-01 100.0% 86.1%
4212424 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.67 62.0 5.61e-01 100.0% 88.5%
3576263 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.67 62.0 5.26e-01 100.0% 88.0%
4317378 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.67 61.0 4.88e-01 100.0% 69.8%
3741868 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.66 61.0 4.77e-01 100.0% 74.1%
4463219 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.65 59.0 4.97e-01 100.0% 80.3%
4111791 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.65 41.0 5.06e-01 82.5% 100.0%
None 0.65 60.0 5.34e-01 100.0% 93.7%
4036893 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.64 40.0 4.99e-01 82.5% 100.0%
3325514 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.64 57.0 5.05e-01 95.2% 96.6%
4307548 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 40.0 4.78e-01 82.5% 95.3%
3480121 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.62 57.0 4.98e-01 100.0% 94.0%
3165405 4246.1.1.0 a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit 0.62 40.0 4.81e-01 82.5% 97.6%
3492201 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.59 29.0 3.66e-01 72.2% 77.3%
4960403 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.59 38.0 4.39e-01 89.7% 90.0%
3377087 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 36.0 2.57e-01 79.4% 21.6%
1296266 12.3.1.8 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.56 48.0 3.83e-01 92.1% 48.4%
5025597 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.56 47.0 4.08e-01 92.1% 58.0%
3722183 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.50 42.0 3.37e-01 92.1% 90.0%
D2 medium residues 144-266
PDB