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IMGVR_UViG_3300009688_000661-3300009688-Ga0116176_1000116238
Arc-VirIMGVR_UViG_3300009688_000661-3300009688-Ga0116176_1000116238
Identity
- Kingdom:
- archaea
Quality
76.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-98
Domain cluster:
representative
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.82 | 71.0 | 6.26e-01 | 93.5% | 92.0% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 69.0 | 6.76e-01 | 91.9% | 91.0% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 63.0 | 6.28e-01 | 90.3% | 81.5% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.80 | 62.0 | 5.16e-01 | 98.4% | 49.1% |
| 3etvA01 | 1.10.287.3290 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 67.0 | 6.05e-01 | 93.5% | 67.9% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 66.0 | 6.25e-01 | 96.8% | 77.0% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.79 | 58.0 | 6.32e-01 | 82.3% | 100.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.79 | 70.0 | 6.25e-01 | 96.8% | 77.6% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 66.0 | 6.65e-01 | 91.9% | 100.0% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.78 | 67.0 | 5.79e-01 | 95.2% | 60.8% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 66.0 | 4.94e-01 | 93.5% | 40.0% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 68.0 | 6.49e-01 | 98.4% | 90.4% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.78 | 68.0 | 6.48e-01 | 98.4% | 91.7% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.78 | 69.0 | 6.22e-01 | 98.4% | 76.5% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 60.0 | 5.59e-01 | 83.9% | 81.8% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 65.0 | 5.69e-01 | 91.9% | 75.6% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.77 | 67.0 | 6.24e-01 | 96.8% | 89.6% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 66.0 | 6.10e-01 | 95.2% | 75.6% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.77 | 67.0 | 6.63e-01 | 95.2% | 98.4% |
| 4wesB03 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.76 | 53.0 | 4.86e-01 | 88.7% | 57.0% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 67.0 | 6.26e-01 | 98.4% | 79.2% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.76 | 67.0 | 5.24e-01 | 100.0% | 61.7% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 63.0 | 5.55e-01 | 91.9% | 65.9% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.76 | 64.0 | 5.46e-01 | 95.2% | 58.8% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 65.0 | 4.43e-01 | 96.8% | 47.3% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 64.0 | 5.56e-01 | 98.4% | 69.7% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 64.0 | 6.13e-01 | 95.2% | 97.2% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.74 | 61.0 | 6.27e-01 | 95.2% | 94.9% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.74 | 57.0 | 5.19e-01 | 96.8% | 61.9% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.74 | 64.0 | 5.40e-01 | 98.4% | 84.0% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.74 | 64.0 | 5.86e-01 | 98.4% | 98.8% |
| 3h6pC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 60.0 | 6.26e-01 | 91.9% | 100.0% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.72 | 65.0 | 4.05e-01 | 100.0% | 53.6% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 61.0 | 5.74e-01 | 95.2% | 94.7% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.72 | 62.0 | 5.97e-01 | 96.8% | 84.5% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 49.0 | 4.55e-01 | 93.5% | 56.4% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 61.0 | 5.24e-01 | 98.4% | 73.5% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 55.0 | 5.49e-01 | 93.5% | 81.5% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 61.0 | 5.98e-01 | 100.0% | 98.6% |
| 5lnkA00 | 1.20.58.1610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 | 0.70 | 62.0 | 5.06e-01 | 100.0% | 53.0% |
| 2etnB01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.70 | 61.0 | 5.72e-01 | 98.4% | 89.5% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 59.0 | 5.01e-01 | 98.4% | 58.2% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.70 | 57.0 | 5.78e-01 | 95.2% | 93.4% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 53.0 | 4.81e-01 | 83.9% | 63.5% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.69 | 53.0 | 5.36e-01 | 83.9% | 87.1% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.69 | 53.0 | 4.99e-01 | 95.2% | 68.4% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.69 | 56.0 | 5.80e-01 | 90.3% | 96.6% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 59.0 | 5.56e-01 | 100.0% | 82.1% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 57.0 | 4.50e-01 | 98.4% | 59.0% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.67 | 57.0 | 5.54e-01 | 96.8% | 94.3% |
| 4ivfA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 59.0 | 4.83e-01 | 100.0% | 66.4% |
| 3pwfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 51.0 | 4.12e-01 | 87.1% | 50.4% |
| 1j30A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 55.0 | 4.35e-01 | 96.8% | 47.5% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.67 | 53.0 | 4.70e-01 | 88.7% | 61.5% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 56.0 | 5.57e-01 | 96.8% | 95.3% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 53.0 | 5.13e-01 | 98.4% | 80.3% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 53.0 | 5.13e-01 | 91.9% | 78.1% |
| 3ns4A00 | 1.10.357.110 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus | 0.66 | 57.0 | 4.00e-01 | 98.4% | 44.9% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.65 | 52.0 | 5.17e-01 | 93.5% | 88.1% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.63 | 51.0 | 4.82e-01 | 90.3% | 91.9% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 54.0 | 4.62e-01 | 98.4% | 59.8% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 53.0 | 5.30e-01 | 98.4% | 98.4% |
| 3fxdC00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 44.0 | 4.74e-01 | 75.8% | 94.0% |
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.62 | 55.0 | 4.22e-01 | 98.4% | 69.1% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.57 | 44.0 | 4.42e-01 | 90.3% | 87.5% |
| 2x6hA03 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.56 | 43.0 | 3.08e-01 | 85.5% | 26.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3498895 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.86 | 71.0 | 5.26e-01 | 88.7% | 37.9% |
| 3450594 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.84 | 77.0 | 6.47e-01 | 100.0% | 86.0% |
| 5018636 | 605.1.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_2 | 0.84 | 70.0 | 6.72e-01 | 96.8% | 78.6% |
| 3797638 | 3456.1.1.0 ↗ | extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A | 0.82 | 66.0 | 5.27e-01 | 98.4% | 46.1% |
| 3794795 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.82 | 72.0 | 6.02e-01 | 95.2% | 63.0% |
| 3218879 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.81 | 69.0 | 7.05e-01 | 91.9% | 98.3% |
| 4557259 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.81 | 70.0 | 6.40e-01 | 93.5% | 78.8% |
| 3215306 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.80 | 68.0 | 6.06e-01 | 98.4% | 67.1% |
| 4048127 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 70.0 | 6.23e-01 | 95.2% | 98.8% |
| 4475138 | 606.1.1.16 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Transposase_20 | 0.79 | 70.0 | 4.82e-01 | 98.4% | 31.5% |
| 5035167 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.78 | 70.0 | 4.18e-01 | 98.4% | 16.0% |
| 2142296 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.78 | 65.0 | 5.58e-01 | 91.9% | 60.2% |
| 3927560 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.78 | 67.0 | 6.78e-01 | 95.2% | 98.3% |
| 4942772 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.78 | 63.0 | 6.27e-01 | 96.8% | 84.6% |
| 3697208 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.78 | 68.0 | 5.35e-01 | 96.8% | 76.0% |
| 3930829 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 67.0 | 6.34e-01 | 96.8% | 82.7% |
| 3349325 | 5086.1.1.135 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 | 0.78 | 69.0 | 6.30e-01 | 98.4% | 78.8% |
| 3681259 | 5058.1.1.57 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › V-SNARE | 0.78 | 67.0 | 6.00e-01 | 95.2% | 71.8% |
| 3482751 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.77 | 64.0 | 6.39e-01 | 91.9% | 87.7% |
| 4174713 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.77 | 60.0 | 5.56e-01 | 95.2% | 66.3% |
| 4672672 | 198.3.1.0 ↗ | alpha arrays › Saposin-like › PAS factor › PAS factor | 0.77 | 63.0 | 5.80e-01 | 91.9% | 70.0% |
| 4405928 | 5086.1.1.196 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YknX | 0.76 | 66.0 | 6.41e-01 | 98.4% | 91.4% |
| 3227955 | 2484.8.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 | 0.76 | 66.0 | 4.38e-01 | 100.0% | 54.6% |
| 3398473 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.75 | 68.0 | 5.56e-01 | 100.0% | 58.2% |
| 3946910 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.75 | 65.0 | 4.67e-01 | 98.4% | 46.5% |
| 4984327 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 66.0 | 5.55e-01 | 100.0% | 90.5% |
| 4025 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.75 | 64.0 | 5.56e-01 | 98.4% | 69.7% |
| 4453744 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.75 | 64.0 | 5.31e-01 | 98.4% | 54.5% |
| 3676117 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 64.0 | 4.21e-01 | 96.8% | 23.8% |
| 1821875 | 4970.1.1.1 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B | 0.74 | 59.0 | 6.09e-01 | 88.7% | 91.5% |
| 3391706 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.74 | 64.0 | 5.03e-01 | 98.4% | 49.2% |
| 3838686 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.73 | 58.0 | 5.93e-01 | 90.3% | 91.7% |
| 3898566 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.73 | 62.0 | 4.86e-01 | 98.4% | 50.7% |
| 3449618 | 3456.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › Oxidored_q4 | 0.73 | 60.0 | 4.53e-01 | 98.4% | 37.4% |
| 5038564 | 3456.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › Oxidored_q4 | 0.72 | 61.0 | 4.89e-01 | 98.4% | 48.0% |
| 3847053 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.71 | 58.0 | 5.43e-01 | 98.4% | 73.3% |
| 139558 | 109.1.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PAT1 | 0.71 | 60.0 | 4.84e-01 | 93.5% | 52.5% |
| 4243427 | 3560.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Med8 | 0.71 | 58.0 | 4.35e-01 | 91.9% | 39.4% |
| 4565268 | 3560.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Med8 | 0.71 | 58.0 | 4.13e-01 | 91.9% | 34.2% |
| 3960219 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.71 | 59.0 | 5.63e-01 | 96.8% | 84.0% |
| 3180581 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.70 | 59.0 | 5.42e-01 | 98.4% | 77.6% |
| 1790834 | 3086.1.1.1 ↗ | alpha bundles › Diacylglycerol kinase (DAGK) › Diacylglycerol kinase (DAGK) › Diacylglycerol kinase (DAGK) › DAGK_prokar | 0.70 | 59.0 | 5.44e-01 | 100.0% | 91.7% |
| 3527434 | 6006.1.1.6 ↗ | extended segments › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › PF27661 | 0.70 | 60.0 | 4.55e-01 | 100.0% | 55.5% |
| 3469530 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.69 | 62.0 | 4.72e-01 | 98.4% | 81.4% |
| 3580280 | 604.1.1.192 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26998 | 0.69 | 56.0 | 5.03e-01 | 96.8% | 65.3% |
| 3669004 | 611.9.1.0 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain | 0.67 | 56.0 | 5.20e-01 | 95.2% | 77.5% |
| 4265467 | 2486.1.1.6 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ACCA | 0.67 | 56.0 | 3.61e-01 | 98.4% | 19.1% |
| 5060572 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.65 | 56.0 | 3.69e-01 | 100.0% | 25.1% |
| 4081214 | 605.1.1.290 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Phage_Nu1 | 0.65 | 52.0 | 5.08e-01 | 100.0% | 82.9% |
| 4177363 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 52.0 | 4.17e-01 | 98.4% | 44.1% |
| 3623892 | 150.1.1.109 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › LUC7 | 0.62 | 49.0 | 3.82e-01 | 93.5% | 43.9% |
| None | — | 0.57 | 46.0 | 3.16e-01 | 93.5% | 23.6% |